DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment UQCR-Q and Uqcrq

DIOPT Version :9

Sequence 1:	NP_001189124.1	Gene:	UQCR-Q / 39950	FlyBaseID:	FBgn0036728	Length:	89	Species:	Drosophila melanogaster
Sequence 2:	XP_038942489.1	Gene:	Uqcrq / 497902	RGDID:	1562350	Length:	101	Species:	Rattus norvegicus

Alignment Length:	95	Identity:	32/95 - (33%)
Similarity:	50/95 - (52%)	Gaps:	18/95 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 GQHFGNLAKVHGIVTYKLSPFEQRAFAGAISKGLPNMVRRFRSNVFIVTP------------PFI 61
            |:.||||.::..:::|.|||||||||....|||:||::||.|..:..|.|            ||:
  Rat     2 GREFGNLTRIRHVISYSLSPFEQRAFPHYFSKGIPNVLRRTRERILRVAPRECGAGGVRPRAPFL 66

  Fly    62 ------VGYLIYDLTERKHTALLRKNPADY 85
                  :.:|.|.....|.|.:...:|:::
  Rat    67 PTSSTDMEFLSYRNDWPKVTWVTPTSPSEH 96

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
UQCR-Q	NP_001189124.1	UcrQ	11..86	CDD:397200	31/93 (33%)
Uqcrq	XP_038942489.1	UcrQ	4..>51	CDD:397200	23/46 (50%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166348821
Domainoid	1	1.000	80	1.000	Domainoid score	I8427
eggNOG	1	0.900	-	-		E1_KOG4116
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H40942
Inparanoid	1	1.050	87	1.000	Inparanoid score	I5056
OMA	1	1.010	-	-		QHG49734
OrthoDB	1	1.010	-	-		D1523793at2759
OrthoFinder	1	1.000	-	-		FOG0005141
OrthoInspector	1	1.000	-	-		oto96634
orthoMCL	1	0.900	-	-		OOG6_105128
Panther	1	1.100	-	-	LDO	PTHR12119
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X5494
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	15	14.810