DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SecCl and glra4a

DIOPT Version :10

Sequence 1:NP_648984.2 Gene:SecCl / 39949 FlyBaseID:FBgn0036727 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001429032.1 Gene:glra4a / 83413 ZFINID:ZDB-GENE-010410-3 Length:457 Species:Danio rerio


Alignment Length:517 Identity:144/517 - (27%)
Similarity:236/517 - (45%) Gaps:93/517 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ITLILVLSI------WTSVGVKAEEEECPSMADAGSLQQTQLIQRLT-HVCRYDRLERPFEYDSD 69
            |.::.|||.      :..:|...||.:..|......:..:..:.:|. ....||...||     :
Zfish     6 IRILYVLSFFFFQGGFIRLGSCKEEIKSSSRPAQKPMSPSDFLDKLMGRTSGYDARIRP-----N 65

  Fly    70 GKRLPIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKAFNRSDNILGQKHLSERLWL 134
            .|..|:.|...|::....::....:.::::..|:.::.|.||||..:..:...|....| :.:|.
Zfish    66 FKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDASLDLDPSML-DSIWK 129

  Fly   135 PHIFFANERESSI--LGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLES 197
            |.:|||||:.::.  :.||.|  |..:...|||:.|.|:...|.|.|:.:.||.|.|.|:..|||
Zfish   130 PDLFFANEKGANFHEVTTDNK--LLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLES 192

  Fly   198 WMYNTSDLILEWEPHTPISFDPEMRLTEYNMAQFWHNTTIVQSD-GDNLRHGAFAGNYSSLSFTV 261
            :.|..:|||.||....|:....::.|.::.:.:        :.| |...:| ...|.::.:....
Zfish   193 FGYTMNDLIFEWLSDNPVQVADDLTLPQFVLKE--------EKDLGYCTKH-YNTGKFTCIEVKF 248

  Fly   262 NLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKVSY 326
            :|:|::|:||:..|:||::||.:||||||:..||:|.|:.||.:|:|:..|.||....:||||||
Zfish   249 HLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSY 313

  Fly   327 IKVSEVWFLGCTFFIFGSLVEFAFVNTIWRR-KENIELKKVNSKYIIKSTLTPRPARRQIGGSLS 390
            :|..::|...|..|:|.:|:|:|.||.:.|: ||.|.|:|             :..|::|...|.
Zfish   314 VKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFIRLRK-------------KQRRQRIEEELV 365

  Fly   391 NESRA--------RSCSSLDNIVSSTESVRNGNGTVNQGFNNYLTVHPNLPIIRTECAEADTVSI 447
            .|||.        ..|            ::..:||..:|.:.:.   |..|:......||.....
Zfish   366 RESRGFYFRGYGLGHC------------LQTKDGTAVEGSSVFA---PPPPVQVLYDGEAVRKRF 415

  Fly   448 CSARTNNDHIVDVDKDKKDTPPTFTTMTPQEIAMWIDRRSRFLFPAMFLAFNALYWTFVYVL 509
                        ||:.|:                 ||..||.:||..||.||..||....||
Zfish   416 ------------VDRAKR-----------------IDTISRAVFPLSFLIFNVFYWITYKVL 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecClNP_648984.2 LIC 43..505 CDD:455710 134/474 (28%)
glra4aNP_001429032.1 None

Return to query results.
Submit another query.