Protein Alignment SecCl and gabrb4

DIOPT Version :10

• Sequence 1: NP_648984.2
• Gene: SecCl / 39949
• FlyBaseID: FBgn0036727
• Length: 509
• Species: Drosophila melanogaster
• Sequence 2: XP_005173931.1
• Gene: gabrb4 / 566514
• ZFINID: ZDB-GENE-070424-211
• Length: 512
• Species: Danio rerio
• Alignment Length: 497
• Identity: 131/497 - (26%)
• Similarity: 235/497 - (47%)
• Gaps: 79/497 - (15%)

  Fly    57 YDRLERPFEYDSDGKRLPIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKAFNRSDN 121
            ||...||   |..|.  |::|...|.:..:.:::...:.:.:....|..::||||||.  ..:.|
Zfish    49 YDIRLRP---DFGGP--PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYA--EMALN 106

  Fly   122 ILGQKHLSERLWLPHIFFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPF 186
            :.....::::||||..:|.|:::|.:.|...|:.:..|.|:|.|:...|:..:..|.|:.:::|.
Zfish   107 LTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPL 171

  Fly   187 DQQFCSTVLESWMYNTSDLILEWE-PHTPISFDPEMRLTEYNMAQFWHNTTIVQSDGDNLRHGAF 250
            |:|.|:..:||:.|.|.|::..|: ....::...::.|.::::.:.    .:|.      |...|
Zfish   172 DEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSIVEL----RLVS------REVRF 226

  Fly   251 -AGNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLS 314
             .|:|..||.:..:||.||:::|..|:||::|..:||||||:..|||..|:.||.:|:|:..|::
Zfish   227 TTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTIN 291

  Fly   315 SSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVNTIW-------RRKENIELKKVNS---K 369
            :...:.|||:.|:|..:|:.:||..|:|.:|:|:||||.::       ::|.|..|.|.|:   :
Zfish   292 THLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQKKINERLNKANNERPR 356

  Fly   370 YIIK--------------STLTPRPARRQIGGSLSNESRARSCSSLDNIVSSTESVRNG------ 414
            |..|              :||.....||.:   ...|.|.....:..||:.:|..:.|.
Zfish   357 YEEKRLREQDSISAPFQSNTLRSYTQRRNL---YLEEQRKVGVDAYGNILLTTLEMNNEVMPSDV 418

  Fly   415 NGTVNQGFNNYLTVHPNLPIIRTECAEADTVS-------------ICSARTNNDHIVDVDKDKKD 466
            ..:|:...|:.::...:....|......|..|             .|..|..:..:       |.
Zfish   419 GSSVSDSRNSVMSFDSSGVQFRKPMGSRDGFSHHSLDRSAMRSRANCRLRRRSSKL-------KL 476

  Fly   467 TPPTFTTMTPQEIAMWIDRRSRFLFPAMFLAFNALYWTFVYV 508
            ..|..|.::.      ||:.||.:||..|..||.:||.: ||
Zfish   477 KIPNLTDVST------IDKWSRIIFPITFGFFNLIYWLY-YV 511

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SecCl	NP_648984.2	LIC	43..505	CDD:455710	129/492 (26%)
gabrb4	XP_005173931.1	LIC	13..510	CDD:273305	129/494 (26%)