DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecCl and LOC561083

DIOPT Version :10

Sequence 1:NP_648984.2 Gene:SecCl / 39949 FlyBaseID:FBgn0036727 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_009295726.2 Gene:LOC561083 / 561083 -ID:- Length:471 Species:Danio rerio


Alignment Length:461 Identity:119/461 - (25%)
Similarity:218/461 - (47%) Gaps:64/461 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 QRLTHVCRYDRLERPFEYDSDGKRLPIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAY 113
            ::|..:..:|...||   ...|..:|:.:.  :.|..:.:::...:.|.|...|:..::|:|||:
Zfish    67 EQLLRIEDHDFAMRP---AFGGSAIPVGID--VQVESIDSISEVNMDFTMTLYLRHYWKDERLAF 126

  Fly   114 KAFNRSDNILGQKHLSERLWLPHIFFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCW 178
            .:.|........: |.:::|.|.:||.:.:.|.|..|..::::..:.|:||::.|.|:..:..|.
Zfish   127 PSSNNLSRTFDGR-LVKKIWKPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSVRITVTSLCS 190

  Fly   179 MNFQKFPFDQQFCSTVLESWMYNTSDLILEWEPHTPISFDPEMRLTEYNMAQFWHNTTIVQSDGD 243
            |:|.:||.|.|.||..|||:.||.:||:|.|:.........|:.|:::.:.:|            
Zfish   191 MDFSRFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIALSQFFIEEF------------ 243

  Fly   244 NLRHG----AFAGNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGT 304
            ::.||    :..|.|:.|.....|:|.|.|::|..|.|:|::|.:||||||:...|.|.|:.||.
Zfish   244 HVSHGLALYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVVLSWVSFWIDRRAVPARVSLGI 308

  Fly   305 STMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVNTIWRRKENIELKKVN-S 368
            :|:|:..|:.:..|.::|:|||:|..:|:......|:|.:::|:|.||....::|..:||::. |
Zfish   309 TTVLTMSTIITGVSTSMPQVSYVKAVDVYLWTSFLFVFLTVIEYAAVNYFTTKEEMKKLKQLKIS 373

  Fly   369 KYIIKSTLTPRPARRQIGGSLSNESRARSCSSLDNIVSSTESVRNGNGTVNQGFNNYLTVHPNLP 433
            :|.....:............||:..|....:: |..|||..|                |.....|
Zfish   374 EYDASQAMAFDGCFHDQDIELSSFPRLSDLNA-DTCVSSRNS----------------TTADLPP 421

  Fly   434 IIRTECAEADTVSICSARTNNDHIVDVDKDKKDTPPTFTTMTPQEIAMWIDRRSRFLFPAMFLAF 498
            ::.|......::     |.:.:||::                   .:..||..||..||..:..|
Zfish   422 VLGTRLRRRRSI-----RQSVNHIIN-------------------NSYKIDSYSRICFPLAYFLF 462

  Fly   499 NALYWT 504
            |.:||:
Zfish   463 NLIYWS 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecClNP_648984.2 LIC 43..505 CDD:455710 119/461 (26%)
LOC561083XP_009295726.2 None

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