Sequence 1: | NP_001261986.1 | Gene: | SecCl / 39949 | FlyBaseID: | FBgn0036727 | Length: | 509 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
Alignment Length: | 388 | Identity: | 86/388 - (22%) |
---|---|---|---|
Similarity: | 136/388 - (35%) | Gaps: | 101/388 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 58 DRLERPF--EYDSDGKRL----PIVVKTRIYVYF--LQNLNSDLLQFKMHALLQLRFQDKRLAYK 114
Fly 115 AFNRSDNILGQKHLSERLWLPHIFFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWM 179
Fly 180 NFQKFPFDQQFCSTVLESW---------------MYNTSDLIL--EWEPHTPISFDPEMRLTEYN 227
Fly 228 MAQFWHNTTIVQSDGDNLRHGAFAGNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQ 292
Fly 293 ADASPPRIMLG-------TSTMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAF 350
Fly 351 VNTIWRRKENIELKKVNSKYIIKSTLTPRPARRQIGG-----------SLSNESRARSCSSLD 402 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SecCl | NP_001261986.1 | LIC | 43..505 | CDD:273305 | 86/388 (22%) |
Neur_chan_LBD | 44..267 | CDD:280998 | 51/233 (22%) | ||
Neur_chan_memb | 275..503 | CDD:280999 | 34/146 (23%) | ||
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 86/388 (22%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 50/232 (22%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 34/147 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447271 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |