Protein Alignment SecCl and Lcch3

DIOPT Version :10

• Sequence 1: NP_648984.2
• Gene: SecCl / 39949
• FlyBaseID: FBgn0036727
• Length: 509
• Species: Drosophila melanogaster
• Sequence 2: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Alignment Length: 509
• Identity: 141/509 - (27%)
• Similarity: 237/509 - (46%)
• Gaps: 85/509 - (16%)

  Fly    39 AGSLQQ-TQLIQRLTHVCRYDRLERPFEYDSDGKRLPIVVKTRIYVY-FLQNLNSDLLQFKMHAL 101
            ||.|:. ||.|..:..  .||...||   :..|:.|.:.:...|..: .:..:|.|   :.:...
  Fly    34 AGRLENVTQTISNILQ--GYDIRLRP---NFGGEPLHVGMDLTIASFDAISEVNMD---YTITMY 90

  Fly   102 LQLRFQDKRLAYKAFNR----------SDNILGQKHLSERLWLPHIFFANERESSILGTDEKDVL 156
            |...::|:|||:..|.:          ||.:......:|::|:|..||||::.|.:....|::.|
  Fly    91 LNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 155

  Fly   157 TSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLESWMYNTSDLILEWEPHTPISFDPEM 221
            ..|..:|.|....|...:|.|.|:...:|.|.|.|:..:||:.|..||:::.|:| ||:....:.
  Fly   156 VRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP-TPVRGVEDA 219

  Fly   222 RLTEYNMAQFWHNTTIVQSDGDNLRHGAFAGNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISW 286
            .|.::         ||:..:.::.:.....|.|..||.:..|:|.||:::...||||::||.:||
  Fly   220 ELPQF---------TIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 275

  Fly   287 VSFWLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFV 351
            ||||:..:|:..|:.||.:|:|:..|:|:....:||::||:|..:::.:.|..|:|.:|:|:|.|
  Fly   276 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 340

  Fly   352 N-TIWRRKENIELKKVNSKYIIKSTLTPRPARRQIGGSLSNESRARSCSSLDNIV-------SST 408
            | |.|.::...::|||               :....|.:....|:.:||:.::|:       |..
  Fly   341 NYTYWGKRAKKKIKKV---------------KECCPGKIGKSERSETCSTTEDIIELQDVRMSPI 390

  Fly   409 ESVRN----------GNGTVNQG--------FNNYLTVHPNLPIIRTECAEADTVSICSARTNND 455
            .|:|.          |..|:|.|        ..||.|.|..|   |......     .|.|....
  Fly   391 PSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQL---RRRAQRG-----ISTRPRML 447

  Fly   456 HIVDVDKDKKDTPPTFTTMTPQEIAMWIDRRSRFLFPAMFLAFNALYWTFVYVL 509
            |.:     |:.......|:...:....||:.||.:||..|||||..||.| |:|
  Fly   448 HAL-----KRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLF-YIL 495

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SecCl	NP_648984.2	LIC	43..505	CDD:455710	135/499 (27%)
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	139/505 (28%)