Sequence 1: | NP_001261986.1 | Gene: | SecCl / 39949 | FlyBaseID: | FBgn0036727 | Length: | 509 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023062.1 | Gene: | lgc-43 / 259591 | WormBaseID: | WBGene00008076 | Length: | 679 | Species: | Caenorhabditis elegans |
Alignment Length: | 335 | Identity: | 72/335 - (21%) |
---|---|---|---|
Similarity: | 146/335 - (43%) | Gaps: | 34/335 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 EEEECPSMADAGSLQQTQLIQRLTHVCRYDRLERPFEYDSDGKRLPIVVKTRIYVYFLQNLNSDL 93
Fly 94 LQFKMHALLQLRFQDKRLAYKAFNRSDNI-LGQKHLSERLWLPHIFFANERESSILGTDEKDVLT 157
Fly 158 SLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLESWMYNTSDLILEWEPHTPISFD---- 218
Fly 219 -PEMRLTEYNMAQFWHNTTIVQSDGDNLRHGAFAGNYSSLSFTVNLKREIGFYLLDYYLPSMMIV 282
Fly 283 AISWVSFWLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVE 347
Fly 348 FAFVNTIWRR 357 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SecCl | NP_001261986.1 | LIC | 43..505 | CDD:273305 | 67/321 (21%) |
Neur_chan_LBD | 44..267 | CDD:280998 | 48/228 (21%) | ||
Neur_chan_memb | 275..503 | CDD:280999 | 19/83 (23%) | ||
lgc-43 | NP_001023062.1 | LGIC_ECD_anion | 344..523 | CDD:349788 | 43/196 (22%) |
LGIC_TM | 527..665 | CDD:365787 | 19/88 (22%) | ||
TM1 helix | 527..551 | CDD:349850 | 5/23 (22%) | ||
TM2 helix | 555..577 | CDD:349850 | 3/23 (13%) | ||
TM3 helix | 583..609 | CDD:349850 | 8/25 (32%) | ||
TM4 helix | 610..665 | CDD:349850 | 1/3 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |