Protein Alignment SecCl and Glra1

DIOPT Version :9

• Sequence 1: NP_001261986.1
• Gene: SecCl / 39949
• FlyBaseID: FBgn0036727
• Length: 509
• Species: Drosophila melanogaster
• Sequence 2: XP_006246440.1
• Gene: Glra1 / 25674
• RGDID: 2704
• Length: 457
• Species: Rattus norvegicus
• Alignment Length: 502
• Identity: 137/502 - (27%)
• Similarity: 234/502 - (46%)
• Gaps: 87/502 - (17%)

  Fly    20 IWTSV---GVKAEEEECPSMADAGSLQQTQLIQRLT-HVCRYDRLERPFEYDSDGKRLPIVVKTR 80
            :|.::   .:.|.:|...:.:....:..:..:.:|. ....||...||     :.|..|:.|...
  Rat    11 LWETIVFFSLAASKEADAARSAPKPMSPSDFLDKLMGRTSGYDARIRP-----NFKGPPVNVSCN 70

  Fly    81 IYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKAFNRSDNILGQKHLSERLWLPHIFFANERES 145
            |::....::....:.::::..|:.::.|.||||..: ..|::.....:.:.:|.|.:|||||:.:
  Rat    71 IFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEY-PDDSLDLDPSMLDSIWKPDLFFANEKGA 134

  Fly   146 SI--LGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLESWMYNTSDLILE 208
            ..  :.||.|  |..:|..|||:.|.|:..:|.|.|:.:.||.|.|.|...|||:.|..:|||.|
  Rat   135 HFHEITTDNK--LLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFE 197

  Fly   209 WEPHTPISFDPEMRLTEYNMAQFWHNTTIVQSDGDNLRHGA---FAGNYSSLSFTVNLKREIGFY 270
            |:....:.....:.|.::          |::.:.| ||:..   ..|.::.:....:|:|::|:|
  Rat   198 WQEQGAVQVADGLTLPQF----------ILKEEKD-LRYCTKHYNTGKFTCIEARFHLERQMGYY 251

  Fly   271 LLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKVSYIKVSEVWFL 335
            |:..|:||::||.:||:|||:..||:|.|:.||.:|:|:..|.||....:||||||:|..::|..
  Rat   252 LIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA 316

  Fly   336 GCTFFIFGSLVEFAFVNTIWRR-KENIELKKVNSKYIIKSTLTPRPARRQIGGSLSNESRARSCS 399
            .|..|:|.:|:|:|.||.:.|: ||.:..::                           .|....|
  Rat   317 VCLLFVFSALLEYAAVNFVSRQHKELLRFRR---------------------------KRRHHKS 354

  Fly   400 SLDNIVSSTESVRNGNGTVNQGFNNYLTVHPNLPIIRTECAEA-DTVSICSARTNNDHIVDVDKD 463
            .:.|:....|   .|.|..|  |:.| .:.|       .|.:| |.:|:..|..||
  Rat   355 PMLNLFQDDE---GGEGRFN--FSAY-GMGP-------ACLQAKDGISVKGANNNN--------- 397

  Fly   464 KKDTPPTFTTMTPQEI-------AMWIDRRSRFLFPAMFLAFNALYW 503
             ...|....:.:|:|:       |..||:.||..||..||.||..||
  Rat   398 -TTNPAPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYW 443

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SecCl	NP_001261986.1	LIC	43..505	CDD:273305	134/476 (28%)
		Neur_chan_LBD	44..267	CDD:280998	58/228 (25%)
		Neur_chan_memb	275..503	CDD:280999	71/236 (30%)
Glra1	XP_006246440.1	LIC	7..446	CDD:273305	137/502 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.910