Sequence 1: | NP_001261986.1 | Gene: | SecCl / 39949 | FlyBaseID: | FBgn0036727 | Length: | 509 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000805.1 | Gene: | GABRB3 / 2562 | HGNCID: | 4083 | Length: | 473 | Species: | Homo sapiens |
Alignment Length: | 487 | Identity: | 130/487 - (26%) |
---|---|---|---|
Similarity: | 222/487 - (45%) | Gaps: | 97/487 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 YDRLERPFEYDSDGKRLPIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKAFNRSDN 121
Fly 122 ILGQKHLSERLWLPHIFFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPF 186
Fly 187 DQQFCSTVLESWMYNTSDLILEWEPHTPISFD-----------PEMRLTEYNMAQFWHNTTIVQS 240
Fly 241 DGDNLRHGAFA-GNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGT 304
Fly 305 STMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVNTIW-----RRKENIELK 364
Fly 365 KVNSK---------------YIIKSTLTPRPARRQIGGSLSNESRARSCSSLDN--IVSSTESV- 411
Fly 412 RNGNGTVNQGFNNYLTVHPNLPIIRTECAEADTVSICSARTNNDHIVDVDKDKKDTPPTFTTMTP 476
Fly 477 QEIAMWIDRRSRFLFPAMFLAFNALYWTFVYV 508 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SecCl | NP_001261986.1 | LIC | 43..505 | CDD:273305 | 128/482 (27%) |
Neur_chan_LBD | 44..267 | CDD:280998 | 55/221 (25%) | ||
Neur_chan_memb | 275..503 | CDD:280999 | 68/250 (27%) | ||
GABRB3 | NP_000805.1 | LIC | 10..471 | CDD:273305 | 128/484 (26%) |
Benzamidine binding, agonist. /evidence=ECO:0000269|PubMed:24909990 | 120..122 | 0/1 (0%) | |||
Benzamidine binding, agonist. /evidence=ECO:0000269|PubMed:24909990, ECO:0007744|PDB:4COF | 180..182 | 1/1 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3673 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.760 |