Protein Alignment SecCl and Gabrb3

DIOPT Version :10

• Sequence 1: NP_648984.2
• Gene: SecCl / 39949
• FlyBaseID: FBgn0036727
• Length: 509
• Species: Drosophila melanogaster
• Sequence 2: NP_058761.2
• Gene: Gabrb3 / 24922
• RGDID: 2651
• Length: 473
• Species: Rattus norvegicus
• Alignment Length: 486
• Identity: 127/486 - (26%)
• Similarity: 220/486 - (45%)
• Gaps: 95/486 - (19%)

  Fly    57 YDRLERPFEYDSDGKRLPIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKAFNRSDN 121
            ||...||   |..|.  |:.|...|.:..:..::...:.:.:....|..::||||||.....  |
  Rat    48 YDIRLRP---DFGGP--PVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPL--N 105

  Fly   122 ILGQKHLSERLWLPHIFFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPF 186
            :.....::::||:|..:|.|:::|.:.|...|:.:..|.|:|.|:...|:..:..|.|:.:::|.
  Rat   106 LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPL 170

  Fly   187 DQQFCSTVLESWMYNTSDLILEWEPHTPISFD-----------PEMRLTEYNMAQFWHNTTIVQS 240
            |:|.|:..:||:.|.|.|:...|.     ..|           |:..:.|:.:..
  Rat   171 DEQNCTLEIESYGYTTDDIEFYWR-----GGDKAVTGVERIELPQFSIVEHRLVS---------- 220

  Fly   241 DGDNLRHGAFA-GNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGT 304
                 |:..|| |.|..||.:..|||.||:::|..|:||::|..:||||||:..|||..|:.||.
  Rat   221 -----RNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280

  Fly   305 STMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVNTIW-----RRKENIELK 364
            :|:|:..|:::...:.|||:.|:|..:::.:||..|:|.:|:|:||||.|:     :|::.:..|
  Rat   281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEK 345

  Fly   365 KVNSK---------------YIIKSTLTPRPARRQIGGSLSNESRARSCSSLDN--IVSSTESVR 412
            ...:|               .|:.:.:.......::.||:.:  ...|..|.||  |....:|:
  Rat   346 TAKAKNDRSKSEINRVDAHGNILLAPMDVHNEMNEVAGSVGD--TRNSAISFDNSGIQYRKQSM- 407

  Fly   413 NGNGTVNQGFNNYLTVHPNLPIIRTECAEADTVSICSARTNNDHIVDVDKDKKDTPPTFTTMTPQ 477
                 ..:|...|:. ..::|..:|                  |:.......|...|..|.:..
  Rat   408 -----PKEGHGRYMG-DRSIPHKKT------------------HLRRRSSQLKIKIPDLTDVNA- 447

  Fly   478 EIAMWIDRRSRFLFPAMFLAFNALYWTFVYV 508
                 |||.||.:||..|..||.:||.: ||
  Rat   448 -----IDRWSRIVFPFTFSLFNLVYWLY-YV 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SecCl	NP_648984.2	LIC	43..505	CDD:455710	125/481 (26%)
Gabrb3	NP_058761.2	LIC	10..471	CDD:273305	125/483 (26%)