Protein Alignment SecCl and lgc-51

DIOPT Version :9

• Sequence 1: NP_001261986.1
• Gene: SecCl / 39949
• FlyBaseID: FBgn0036727
• Length: 509
• Species: Drosophila melanogaster
• Sequence 2: NP_001293359.1
• Gene: lgc-51 / 184377
• WormBaseID: WBGene00017399
• Length: 450
• Species: Caenorhabditis elegans
• Alignment Length: 489
• Identity: 120/489 - (24%)
• Similarity: 207/489 - (42%)
• Gaps: 87/489 - (17%)

  Fly    38 DAGSLQQTQLIQRLTHVCRYDRLERPFEYDSDGKRLPIVVKTRIYVYFLQNLNSDLLQFKMHALL 102
            |.||..:.....|||.....|.:...:.....|.  |:.|:..:.|..:..|:.....|......
 Worm    17 DEGSFVEKCTKPRLTPAAILDVIMANYSRSLPGN--PVGVQVEVTVQDVMELSVLSNSFTADIWF 79

  Fly   103 QLRFQDKRLAYKAF-NRSDNILGQKHLSERLWLPHIFFANERESSILGTDEKDVLTSLSPEGNVI 166
            ...:.|.||||... |...|:.......:.:|.|::...|.:.:.:..:.:.:||..|.|.|.:.
 Worm    80 SSIWYDPRLAYSHLDNCRQNLSFDDRFEKLIWSPNVCIVNTKSAHVHRSPKPNVLLMLLPNGTIW 144

  Fly   167 ISTRMQASLYCWMNFQKFPFDQQFCSTVLESWMYNTSDLILEWEPHTPISFDPEMRLTEYNMAQF 231
            ::.|::....|.|:..:||.|.|:|..|.||:.|||:.:.:.|..: |::..||:.|.:::::::
 Worm   145 LNYRIRVQSPCSMDLARFPIDTQYCQLVFESYSYNTASVSVNWMAN-PVTVLPEISLADFDLSRY 208

  Fly   232 WHNTTIVQSDGDNLRHGAF--AGNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQAD 294
              .|:         ||...  ||.:..|:......|:.|||:|..|:|:.:.:.|||::|.:...
 Worm   209 --RTS---------RHTEVYKAGEWYRLTVEFEFTRKYGFYILQLYVPTYISLFISWIAFCIDTK 262

  Fly   295 ASPPRIMLGTSTMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVNTIWRRKE 359
            |.|.||:||.::::|......:..::||.|||:|..::|...|..|||.||:|.|||
 Worm   263 ALPARIVLGVNSLMSLTFQFGNIIRSLPPVSYVKAIDLWMCTCVGFIFASLLELAFV-------- 319

  Fly   360 NIELKKVNSKYIIKSTLTPRPARRQIGGSLSNESRARSCSSLDNIVSSTESVRNGNGTVNQGFNN 424
                ...:.|.|:||                    .:|.:::..:||..:..        :.:::
 Worm   320 ----AYQDKKLILKS--------------------GKSNAAISTLVSYLKHF--------EPYHD 352

  Fly   425 YLTVHPNLPIIRTECAEADTVSICSARTNNDHIVDVDKDKKDTPPTFTTMTPQEIA--------- 480
            ..:..|..|:...:.....|    |..||.........|.||        ..:|||
 Worm   353 VSSPPPPAPLDEKKSMSRTT----STGTNRSRSELDGLDTKD--------LEEEIAEYRKLAYAR 405

  Fly   481 -MW--------IDRRSRFLFPAMFLAFNALYWTF 505
             .|        :||.|..:||..|.|||.:|||:
 Worm   406 KKWRLLDFGANVDRISFIVFPLTFAAFNVVYWTY 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SecCl	NP_001261986.1	LIC	43..505	CDD:273305	116/482 (24%)
		Neur_chan_LBD	44..267	CDD:280998	51/225 (23%)
		Neur_chan_memb	275..503	CDD:280999	59/245 (24%)
lgc-51	NP_001293359.1	LIC	34..440	CDD:273305	114/472 (24%)
		Neur_chan_LBD	35..235	CDD:280998	48/213 (23%)
		Neur_chan_memb	242..437	CDD:280999	59/246 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810