Sequence 1: | NP_001261986.1 | Gene: | SecCl / 39949 | FlyBaseID: | FBgn0036727 | Length: | 509 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379219.1 | Gene: | acc-4 / 176778 | WormBaseID: | WBGene00012099 | Length: | 408 | Species: | Caenorhabditis elegans |
Alignment Length: | 517 | Identity: | 121/517 - (23%) |
---|---|---|---|
Similarity: | 202/517 - (39%) | Gaps: | 142/517 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LILVLSIWTSVG---VKAEEEE-------CPSMADAGSLQQTQ--------LIQRLTHVCRYDRL 60
Fly 61 ERPFEYDSDGKRLPIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKAFN--RSDNIL 123
Fly 124 GQKHLSERLWLPHIFFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQ 188
Fly 189 QFCSTVLESWMYNTSDLILEWEPHTP--ISFDPEMRLTEYNMAQFWHNTTIVQSDGDNLRHGAFA 251
Fly 252 GNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLSSS 316
Fly 317 QSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVNTIWRRKENIELKKVNSKYIIKSTLTPRPA 381
Fly 382 RRQIGGSLSNESRARSCSSLDNIVSSTESVRNGNGTVNQGFNNYLTVHPNLPIIRTECAEADTVS 446
Fly 447 ICSARTNNDHIVDVDKDKKDTPPTFTTMTPQEIAMWIDRRSRFLFPAMFLAFNALYWTFVYV 508 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SecCl | NP_001261986.1 | LIC | 43..505 | CDD:273305 | 109/473 (23%) |
Neur_chan_LBD | 44..267 | CDD:280998 | 51/234 (22%) | ||
Neur_chan_memb | 275..503 | CDD:280999 | 52/227 (23%) | ||
acc-4 | NP_001379219.1 | LGIC_ECD_GABAAR | 74..259 | CDD:349791 | 44/193 (23%) |
LGIC_TM_anion | 263..396 | CDD:349851 | 55/233 (24%) | ||
TM1 helix | 266..286 | CDD:349851 | 10/19 (53%) | ||
TM2 helix | 295..316 | CDD:349851 | 3/20 (15%) | ||
TM3 helix | 326..348 | CDD:349851 | 12/56 (21%) | ||
TM4 helix | 375..396 | CDD:349851 | 10/20 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |