DRSC/TRiP Functional Genomics Resources

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Protein Alignment SecCl and glc-2

DIOPT Version :10

Sequence 1:NP_648984.2 Gene:SecCl / 39949 FlyBaseID:FBgn0036727 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_491470.1 Gene:glc-2 / 172103 WormBaseID:WBGene00001592 Length:434 Species:Caenorhabditis elegans


Alignment Length:502 Identity:120/502 - (23%)
Similarity:214/502 - (42%) Gaps:92/502 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ITLILVLSIWTSVGVKAEEEECPSMADAGSLQQTQLIQRLTHVCRYDRLERPFEYDSDGKRLPIV 76
            :.|:|::.:.|:.....:.|:             :::..|  :..||...||...:|..:. .:.
 Worm    10 LLLLLLMPVVTNGEYSMQSEQ-------------EILNAL--LKNYDMRVRPPPANSSTEG-AVN 58

  Fly    77 VKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYK--AFNRSDNILGQKHLSERLWLPHIFF 139
            |:..|.:..|..::...:::.:....:.::.|.||||:  .|......|...|:.:.||:|..||
 Worm    59 VRVNIMIRMLSKIDVVNMEYSIQLTFREQWIDPRLAYENLGFYNPPAFLTVPHVKKSLWIPDTFF 123

  Fly   140 ANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLESWMYNTSD 204
            ..|:.:.....|.:::...:.|:|.::.|:|:..:..|.|..|.:|.|.|.|:..|.|:.:..:|
 Worm   124 PTEKAAHRHLIDMENMFLRIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMND 188

  Fly   205 LILEWEPHTPISFDPEM--RLTEYNMAQFWHNTTIVQSDGDNLRHGAFAGNYSSLSFTVNLKREI 267
            ::.||:|.||:...|.:  .|..:.:..:..|       .|...| ...|:|..|...:..||:.
 Worm   189 IMYEWDPSTPVQLKPGVGSDLPNFILKNYTTN-------ADCTSH-TNTGSYGCLRMQLLFKRQF 245

  Fly   268 GFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKVSYIKVSEV 332
            .:||:..|.|:.|||.:||||||:...::..|:.||.:|:|:..|:.|:.:..||.|||:||.:|
 Worm   246 SYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDV 310

  Fly   333 WFLGCTFFIFGSLVEFAFVNTIWRRKENIELKKVNSKYIIKSTLTPRPARRQIGGSLSNESRARS 397
            |...|..|:||:|:|:||                                               
 Worm   311 WLGACQTFVFGALLEYAF----------------------------------------------- 328

  Fly   398 CSSLDNIVSSTESVRNGNGTVNQGFNNYLTVHPNLPIIRTECAEADTVSICSARTNNDHIVDVDK 462
                   ||..:|||..:.:..:...........|.::..|..:..    |:..|........||
 Worm   329 -------VSYQDSVRQNDRSREKAARKAQRRREKLEMVDAEVYQPP----CTCHTFEARETFRDK 382

  Fly   463 DKKDTPPTFTTMTPQEIAMWIDRRSRFLFPAMFLAFNALYWTFVYVL 509
            .::    .||  .|..:...||..:||:.|..|||||.:||....::
 Worm   383 VRR----YFT--KPDYLPAKIDFYARFVVPLAFLAFNVIYWVSCLIM 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SecClNP_648984.2 LIC 43..505 CDD:455710 116/465 (25%)
glc-2NP_491470.1 LIC 29..419 CDD:455710 117/477 (25%)

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