Sequence 1: | NP_001261986.1 | Gene: | SecCl / 39949 | FlyBaseID: | FBgn0036727 | Length: | 509 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006538609.2 | Gene: | Gabrd / 14403 | MGIID: | 95622 | Length: | 483 | Species: | Mus musculus |
Alignment Length: | 452 | Identity: | 115/452 - (25%) |
---|---|---|---|
Similarity: | 200/452 - (44%) | Gaps: | 92/452 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 74 PIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKAFNRSDNILG-QKHLSERLWLPHI 137
Fly 138 FFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLESWMYNT 202
Fly 203 SDLILEW-EPHTPISFDPEMRLTEYNMAQFWHNTTIVQSDGDNLRHGAFAGNYSSLSFTVNLKRE 266
Fly 267 IGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKVSYIKVSE 331
Fly 332 VWFLGCTFFIFGSLVEFAFV--NTIWRRKENIELKKVNSK-------YIIKSTLTPRPARRQIGG 387
Fly 388 SLSNESRARSCSSLDNIVSSTESVR-----------NGNGTVNQGFNNYLTVHPNLPIIRTECAE 441
Fly 442 ADTVSICSARTNNDHIVDVDKDKKDTPPTFTTMTPQEIAMWIDRRSRFLFPAMFLAFNALYW 503 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SecCl | NP_001261986.1 | LIC | 43..505 | CDD:273305 | 115/452 (25%) |
Neur_chan_LBD | 44..267 | CDD:280998 | 48/194 (25%) | ||
Neur_chan_memb | 275..503 | CDD:280999 | 63/247 (26%) | ||
Gabrd | XP_006538609.2 | LGIC_ECD | 97..280 | CDD:355788 | 47/193 (24%) |
Cys-loop | 198..212 | CDD:349787 | 6/13 (46%) | ||
LGIC_TM_GABAAR_delta | 283..>371 | CDD:349857 | 38/87 (44%) | ||
TM1 helix | 286..306 | CDD:349857 | 11/19 (58%) | ||
TM2 helix | 315..336 | CDD:349857 | 7/20 (35%) | ||
TM3 helix | 346..368 | CDD:349857 | 10/21 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |