Sequence 1: | NP_001261986.1 | Gene: | SecCl / 39949 | FlyBaseID: | FBgn0036727 | Length: | 509 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_542154.3 | Gene: | Gabra4 / 140675 | RGDID: | 621670 | Length: | 552 | Species: | Rattus norvegicus |
Alignment Length: | 560 | Identity: | 142/560 - (25%) |
---|---|---|---|
Similarity: | 242/560 - (43%) | Gaps: | 100/560 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 ITLILVLSIWT----SVGVKAEEEE-CPSMADAGSLQQTQLIQRLTHVCRYDRLERPFEYDSDGK 71
Fly 72 RLPIV-VKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKA---FNRSDNILGQKHLSERL 132
Fly 133 WLPHIFFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLES 197
Fly 198 WMYNTSDLILEWE--PHTPISFDPE-MRLTEYNMAQFWHNTTIVQSDGDNLRHGAFAGNYSSLSF 259
Fly 260 TVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKV 324
Fly 325 SYIKVSEVWFLG-CTFFIFGSLVEFAFVN-----TIWRRKENIE-----------LKKVNSKYII 372
Fly 373 KSTLTPRPARRQIGGSLSNESRARSCSSLDNIVSSTESVRNGNGTVNQGFNNYLTVHPNLPIIRT 437
Fly 438 ECAEADTVS-----ICSARTNNDH--IVDVDKDKKDTPPTF------------TTMTPQEIAMW- 482
Fly 483 --------------IDRRSRFLFPAMFLAFNALYWTFVYV 508 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SecCl | NP_001261986.1 | LIC | 43..505 | CDD:273305 | 131/519 (25%) |
Neur_chan_LBD | 44..267 | CDD:280998 | 53/229 (23%) | ||
Neur_chan_memb | 275..503 | CDD:280999 | 75/278 (27%) | ||
Gabra4 | NP_542154.3 | LIC | 13..539 | CDD:273305 | 140/557 (25%) |
Neur_chan_LBD | 49..256 | CDD:280998 | 53/228 (23%) | ||
Neur_chan_memb | 263..536 | CDD:280999 | 75/279 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 353..436 | 16/86 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 448..470 | 3/21 (14%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 486..513 | 3/26 (12%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |