DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12229 and AT3G55810

DIOPT Version :9

Sequence 1:NP_648980.1 Gene:CG12229 / 39945 FlyBaseID:FBgn0036723 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_191140.1 Gene:AT3G55810 / 824747 AraportID:AT3G55810 Length:492 Species:Arabidopsis thaliana


Alignment Length:543 Identity:114/543 - (20%)
Similarity:200/543 - (36%) Gaps:132/543 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ARRRKRKRYYHLG-------LVAKLVTETTHDELRRMLENGTYTFHVDTVGNKPDELKAILDTMN 121
            |.|.|.|....||       ::.||:...|.|.||..:.|                         
plant    13 ALRSKTKIVCTLGPVSRSVEMIEKLLKAETLDNLRTAMNN------------------------- 52

  Fly   122 IAISAHSAERELRLTTGL----ALEINGECCRVGRLRNNCTVMLARGGVVTLTTDESYRYKGFKE 182
                           ||:    .|:..|...|.|.|:....:.|.:|..:|::.|  |:.:|...
plant    53 ---------------TGILCAVMLDTKGPEIRTGFLKEGKPIQLNQGQEITISID--YKIEGDSN 100

  Fly   183 IVYVINLRCYLASVQLGDIVMIGREVRGKVVKTLREALTVMIIDA--GLV----------ASYDF 235
            |: .::.:.....|:.||:::..   .|.:      :|||:..|.  |||          .....
plant   101 II-SMSYKKLAEDVKPGDVILCS---DGTI------SLTVLSCDKSFGLVRCRCENSTILGERKN 155

  Fly   236 IELPRQCHALDPDLYPDLYMKD----LEMAASLNANYVVLPKIRCKSFLRAVRQTLNS-DFNLKL 295
            :.||    .:..|| |.|..||    ::.......:.:.|..:|..|.|..||:.|.. ..|:.|
plant   156 VNLP----GIVVDL-PTLTEKDKEDIIQWGVPNKIDIIALSFVRKGSDLTEVRKLLGEHSKNIML 215

  Fly   296 I-------GMIDFEYVRSNMLDLLGIIK--LVDYIWIPDMFNVNCCVYNYIMEDVLPISQCQKKP 351
            :       |:::.|.:..|. |...:.:  |...|.|..||        ...:.::.::....||
plant   216 MSKVENQEGVMNCEKILENS-DAFMVARGDLGMEIQIEKMF--------LAQKTMIKMANALGKP 271

  Fly   352 VI-GTVPLERCSDF---KRFELHD----FLWKVDAIHIQKSPWCNKYP--------LIVKKLMPI 400
            |: .|..||..:..   .|.|..|    .|...|.:.:........:|        .|.|:....
plant   272 VVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPEAAVLTMSRICKEAEDF 336

  Fly   401 KDYRVGAVQNKMVLKSILTSYQTIVNFIIRTISSIECQAIFLFTTCETASVALSRIEIYCPVY-V 464
            .||.:...:...:|...|:..:::...::.|..|:...||.:.|.....:..:::.....|:. |
plant   337 IDYDILHKKTLGMLSLPLSPIESLAASVVSTAQSVFASAIVVLTKGGYTAELVAKYRPSVPILSV 401

  Fly   465 MVP-LEETDDAETITCK---VELARALHLRRNMHPVLYT----KDLN-ECSYSPIEFGVDFMRKK 520
            :|| :.:.:|.| ::|.   ..:||...:.|.:.||:.|    :|.| :.:...|...:.|.:.|
plant   402 IVPEIAQGNDIE-MSCSDSVAHVARRGLIYRGIIPVVATGSSARDSNKDATEEMINLAIGFAKTK 465

  Fly   521 GCLEVGDFVVTLEVGKEDKDNVV 543
            |..:.||.:|.|.  |.|..:||
plant   466 GICKNGDSIVALH--KIDGSSVV 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12229NP_648980.1 pyruv_kin 103..530 CDD:273424 95/482 (20%)
Pyruvate_Kinase 126..530 CDD:304951 95/459 (21%)
AT3G55810NP_191140.1 PLN02461 1..492 CDD:215255 114/543 (21%)
Pyruvate_Kinase 17..491 CDD:304951 112/539 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0469
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11817
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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