DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12229 and PKP-ALPHA

DIOPT Version :9

Sequence 1:NP_648980.1 Gene:CG12229 / 39945 FlyBaseID:FBgn0036723 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_566720.1 Gene:PKP-ALPHA / 821870 AraportID:AT3G22960 Length:596 Species:Arabidopsis thaliana


Alignment Length:560 Identity:111/560 - (19%)
Similarity:205/560 - (36%) Gaps:176/560 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GLVAKLVTETTHDELRRMLENG----TYTFHVDTVGNKP---DELKAI-LDTMNIA--------- 123
            |:....|||.   ||:   |||    ..|..:.|:|...   ::|:|: :..||:|         
plant    97 GIEVDTVTEA---ELK---ENGFRSTRRTKLICTIGPATCGFEQLEALAVGGMNVARLNMCHGTR 155

  Fly   124 -------ISAHSAERELRLTTGLALEINGECCRVGRLRNNCTVMLARGGVVTLTTDE-------- 173
                   .|......|......:.::..|....:|.|....:.....|.|.|.|...        
plant   156 DWHRGVIRSVRRLNEEKGFAVAIMMDTEGSEIHMGDLGGEASAKAEDGEVWTFTVRAFDSSRPER 220

  Fly   174 --SYRYKGFKEIVYVINLRCYLASVQLGDIVMI-GREVRGKVVKTLREALTVMIIDAGLVASYDF 235
              |..|.||.|            .|::||.::: |..||.:|::.:...:..:..|.||:     
plant   221 TISVSYDGFAE------------DVRVGDELLVDGGMVRFEVIEKIGPDVKCLCTDPGLL----- 268

  Fly   236 IELPRQCHALDPDLYPDLYMKDLEMAASLNANYVVLPKIRCKSFLRAVRQTLNSDFNLKLIGMID 300
              |||      .:|   .:.:|..:....||   :||.|..|.:|         |.:..:...:|
plant   269 --LPR------ANL---TFWRDGSLVRERNA---MLPTISSKDWL---------DIDFGIAEGVD 310

  Fly   301 F---EYVRS----NMLDL----------LGIIKLVDYIWIPDMFNVNCCVYNYIMEDV------- 341
            |   .:|:|    |.|..          :|:|..::.  |..:.|         :|::       
plant   311 FIAVSFVKSAEVINHLKSYLAARSRGGEIGVIAKIES--IDSLTN---------LEEIILASDGA 364

  Fly   342 ----------LPISQ-----------CQ--KKPVI-GTVPLERCSDF---KRFELHDFLWKV--- 376
                      :|:.|           |:  .|||| .:..||...::   .|.|:.|....|   
plant   365 MVARGDLGAQIPLEQVPAAQQRIVQVCRALNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQR 429

  Fly   377 -DAIHIQKSPWCNKYP---LIVKKLMPIKD---YRVGAVQNKMVLKSILTSY-----QTIVNFII 429
             ||:.:.......::|   |.|.:.:.::.   :|.......:.|::|.:|:     :.|.|...
plant   430 SDALMLSGESAMGQFPDKALTVLRTVSLRIERWWREEKRHESVPLQAIGSSFSDKISEEICNSAA 494

  Fly   430 RTISSIECQAIFLFTTCETASVALSRIEIYCPVYVMVPLEETDDAETITCKVELARALHLRRNMH 494
            :..:::...|:|::||....:..:||....||::          |.|.|..|.  |.|:|:..:.
plant   495 KMANNLGVDAVFVYTTSGHMASLVSRCRPDCPIF----------AFTTTTSVR--RRLNLQWGLI 547

  Fly   495 P--VLYTKDLNECSYSPIEFGVDFMRKKGCLEVGDFVVTL 532
            |  :.::.|:.    |.:......::.:|.::.||.|:.:
plant   548 PFRLSFSDDME----SNLNKTFSLLKSRGMIKSGDLVIAV 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12229NP_648980.1 pyruv_kin 103..530 CDD:273424 100/525 (19%)
Pyruvate_Kinase 126..530 CDD:304951 92/482 (19%)
PKP-ALPHANP_566720.1 PLN02762 93..596 CDD:215407 111/560 (20%)
Pyruvate_Kinase 117..584 CDD:304951 102/534 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0469
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11817
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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