DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12229 and pkmb

DIOPT Version :9

Sequence 1:NP_648980.1 Gene:CG12229 / 39945 FlyBaseID:FBgn0036723 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_005163170.3 Gene:pkmb / 445094 ZFINID:ZDB-GENE-040801-230 Length:605 Species:Danio rerio


Alignment Length:538 Identity:111/538 - (20%)
Similarity:194/538 - (36%) Gaps:160/538 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 DELRRML-----------ENGTYTFHVDTVGNKPDELKAI----LDTMNIAISAHSAERELRLTT 137
            :.||.|:           .:||:.:|.:|:.:..:.:::.    :|...:||             
Zfish   133 ETLREMILSGMNVARLNFSHGTHEYHAETIKSVREAIESFGAGTIDYRPVAI------------- 184

  Fly   138 GLALEINGECCRVGRLRNNCT--VMLARGGVVTLTTDESYR--------YKGFKEIVYVINLRCY 192
              ||:..|...|.|.::.:.|  |.|.:|.::.||.|:.:.        :..:|.|..|      
Zfish   185 --ALDTKGPEIRTGLIKGSGTEEVKLVKGNIIKLTLDDKFMDNCDENTLWLDYKNITKV------ 241

  Fly   193 LASVQLGDIVMIGREVRGKVVKTL-REALTVMIIDAGLVASYDFIELPRQCHALDPDLYPDLYMK 256
               ||.|..:.:...:....||.: .:.|...|.:.|::.|...:.||..  .:|.....:..:|
Zfish   242 ---VQQGSHIYVDDGLISLKVKEIGSDFLNCEIENGGMLGSKKGVNLPGA--NVDLPAVSEKDIK 301

  Fly   257 DLEMAASLNANYVVLPKIRCKSFLRAVRQTL-NSDFNLKLIGMID-FEYVRSNMLDLLGIIKLVD 319
            ||:.......:.|....||..:.:.|||:.| ....::::|..:: .|.||.  .|  .|::..|
Zfish   302 DLQFGVEQGVDMVFASFIRKAADVHAVRKVLGEKGKDIRIISKLENHEGVRK--FD--EILEASD 362

  Fly   320 YIWIP--DMFNVNCCVYNYIMEDVLPISQCQK--KPVI-GTVPLERCSDFK-----RFELHD--- 371
            .|.:.  |: .:........:...:.||:|.:  ||:| .|..||  |..|     |.|..|   
Zfish   363 GIMVARGDL-GIEIPTEKVFLAQKMMISRCNRIGKPIICATQMLE--SMIKKPRPTRAESSDVAN 424

  Fly   372 -FLWKVDAIHIQKSPWCNKYPL---IVKKLM--------------------------PIKDYRVG 406
             .|...|.|.:.......:||:   :.:.|:                          |.:...||
Zfish   425 AVLDGADCIMLSGETAKGEYPIESVLTQHLIAREAEAAMFHRQLFEELRRTSHLTRDPTESVAVG 489

  Fly   407 AVQNKMVLKSILTSYQTIVNFIIRTISSIEC--QAIFLFTTCETASVALSRIEIYCPVYVMVPLE 469
            ||:                       :|.:|  .||...|....::..|||.....|:.      
Zfish   490 AVE-----------------------ASFKCCASAIICLTKTGRSAQLLSRYRPRAPIM------ 525

  Fly   470 ETDDAETITCKVELARALHLRRNMHPVLYTKDLNECSYSPIEFGVDFMRKKGCLEVGDFVVTLEV 534
                  .:|...:.:|.|||.|.:.|:||||..|:.....::..|.|              .||:
Zfish   526 ------AVTRNGQTSRQLHLYRGVIPILYTKPANDIWAEDVDLRVSF--------------ALEI 570

  Fly   535 GKEDK-----DNVVIGIG 547
            ||..|     |.:::..|
Zfish   571 GKHRKYFKSGDVIIVVTG 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12229NP_648980.1 pyruv_kin 103..530 CDD:273424 98/488 (20%)
Pyruvate_Kinase 126..530 CDD:304951 94/461 (20%)
pkmbXP_005163170.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11817
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.