DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12229 and pkma

DIOPT Version :9

Sequence 1:NP_648980.1 Gene:CG12229 / 39945 FlyBaseID:FBgn0036723 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_955365.1 Gene:pkma / 335817 ZFINID:ZDB-GENE-031201-4 Length:532 Species:Danio rerio


Alignment Length:501 Identity:111/501 - (22%)
Similarity:193/501 - (38%) Gaps:103/501 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 DELRRMLE-----------NGTYTFHVDTVGNKPDELKAILDTMNIAISAHSAERELRLTTGLAL 141
            |.|:.|::           :|::.:|.:|:.|          ......|......:.| ..|:||
Zfish    60 DTLKEMIKSGMNIARMNFSHGSHEYHGETIKN----------VREACASFEPGSIQYR-PVGIAL 113

  Fly   142 EINGECCRVGRLRNNCT--VMLARGGVVTLTTDESYR-----------YKGFKEIVYVINLRCY- 192
            :..|...|.|.::.:.|  |.|.:|..:.:|.|:|:.           ||...::|.| ..:.| 
Zfish   114 DTKGPEIRTGLIKGSGTAEVELKKGNKIKVTLDDSFMENCDEDTLWLDYKNITKVVEV-GSKVYI 177

  Fly   193 ---LASVQLGDIVMIGREVRGKVVKTLREALTVMIIDAGLVASYDFIELPRQCHALDPDLYPDLY 254
               |.|:|   ::.||.:.           |...|.:.|.:.|...:.||..  |:|.....:..
Zfish   178 DDGLISLQ---VLQIGSDY-----------LICEIENGGSLGSKKGVNLPGA--AVDLPAVSEKD 226

  Fly   255 MKDLEMAASLNANYVVLPKIRCKSFLRAVRQTL-NSDFNLKLIGMID-FEYVRSNMLDLLGIIKL 317
            :|||:....:..:.:....||..:.::|||:.| ....|:|:|..:: .|.||  ..|  .|::.
Zfish   227 IKDLQFGVEMGVDMIFASFIRKAADVQAVRKVLGEKGKNIKIISKLENHEGVR--RFD--EIMEA 287

  Fly   318 VDYIWIP--DMFNVNCCVYNYIMEDVLPISQCQK--KPVI-GTVPLERCSDFK-----RFELHD- 371
            .|.|.:.  |: .:........:...:.|.:|.|  ||:| .|..||  |..|     |.|..| 
Zfish   288 SDGIMVARGDL-GIEIPTEKVFLAQKMMIGRCNKAGKPIICATQMLE--SMIKKPRPTRAEGSDV 349

  Fly   372 ---FLWKVDAIHIQKSPWCNKYPL-IVKKLMPIKDYRVGAVQNKMVLK-----SILTSYQTIVNF 427
               .|...|.|.:........||| .|:....|......|..::.:.:     |:||...:....
Zfish   350 ANAVLDGADCIMLSGETAKGDYPLEAVRTQHMIAREAEAATFHRQLFEGLRRSSVLTRDPSDAVA 414

  Fly   428 IIRTISSIECQA--IFLFTTCETASVALSRIEIYCPVYVMVPLEETDDAETITCKVELARALHLR 490
            :....:|.:|.|  |.:.|....::..:||.....|:..:...|:|            ||..||.
Zfish   415 VGAVEASFKCCASGIIILTKTGRSAHLISRYRPRAPILAVTRNEQT------------ARQAHLY 467

  Fly   491 RNMHPVLYTKDLNECSYSPIE----FGVDFMRKKGCLEVGDFVVTL 532
            |.:.|:.|....|:.....::    |.:|..:.:|..:.||.|:.|
Zfish   468 RGIFPIYYNSPSNDVWAEDVDLRVNFAMDVGKARGFFKAGDVVIVL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12229NP_648980.1 pyruv_kin 103..530 CDD:273424 104/471 (22%)
Pyruvate_Kinase 126..530 CDD:304951 101/448 (23%)
pkmaNP_955365.1 Pyruvate_Kinase 43..531 CDD:238178 111/501 (22%)
pyruv_kin 44..528 CDD:273424 111/501 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11817
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.