DRSC/TRiP Functional Genomics Resources

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Protein Alignment frc and AT1G06890

DIOPT Version :10

Sequence 1:NP_524126.1 Gene:frc / 39943 FlyBaseID:FBgn0042641 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_172172.2 Gene:AT1G06890 / 837199 AraportID:AT1G06890 Length:357 Species:Arabidopsis thaliana


Alignment Length:323 Identity:75/323 - (23%)
Similarity:137/323 - (42%) Gaps:35/323 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 IGSALFYGLSSFMITVVNKTVLTSYHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFPPLQRNTFA 128
            ||:.....:||..|.:.||.::::..|.....|:...|..:...|.:...:|:....|.......
plant    12 IGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVALWMKMFEHKPFDPRAVM 76

  Fly   129 KIFPLPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIGG 193
            ....|..|.:|.:...||..   |:..:...:...|..|:|||......:.|..:|.|:..::.|
plant    77 GFGILNGISIGLLNLSLGFN---SVGFYQMTKLAIIPCTVLLETLFFRKKFSRKIQFSLTILLLG 138

  Fly   194 ALLAASDDLSFNMRGYIYVMITNALTA-----SNGVYVKKKLDTSEIGKYGLMYYNSLFMFLPAL 253
            ..:|...||..||.|.:..::....|.     :|.:..|.|:.::::          |:...|..
plant   139 VGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKVSSTQL----------LYQSCPYQ 193

  Fly   254 ALN-YVTGN-LDQALNFEQWNDSVFVVQF--------LLSCVMGFILSYSTILCTQFNSALTTTI 308
            |:. :|||. ||..|.    |.:||..::        :|||::...:::||.|.....|.:|..:
plant   194 AITLFVTGPFLDGLLT----NQNVFAFKYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQV 254

  Fly   309 VGCLKNICVTYLGMFIGGDYVFSWLNCIGINISVLASLLYTYVTF--RRKRAPDKQDHLPSTR 369
            :|.||...|...|..:..| .|.|.|.:||.::|:..::|:|...  .:::|.:....||..:
plant   255 LGHLKTCLVLAFGYVLLRD-PFDWRNILGILVAVIGMVVYSYYCSIETQQKASETSTQLPQMK 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frcNP_524126.1 TPT 67..348 CDD:474852 68/295 (23%)
AT1G06890NP_172172.2 TPT 38..294 CDD:474852 63/273 (23%)

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