DRSC/TRiP Functional Genomics Resources

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Protein Alignment frc and Slc35e3

DIOPT Version :10

Sequence 1:NP_524126.1 Gene:frc / 39943 FlyBaseID:FBgn0042641 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001128159.1 Gene:Slc35e3 / 362883 RGDID:1564876 Length:313 Species:Rattus norvegicus


Alignment Length:344 Identity:77/344 - (22%)
Similarity:138/344 - (40%) Gaps:72/344 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MGGSADRSSLLDGSGSKELSHREREDSALFVKKIGSALFYG-LSSFMITVVNKTVLTSYHFPSFL 94
            |...|||   :.|:|                 :|.:.|.:. |.|..|..:||.:...:.||:  
  Rat     1 MASLADR---VRGNG-----------------RIAAGLLFNLLVSICIVFLNKWIYVHHGFPN-- 43

  Fly    95 FLSLGQLTASIVVLGMGKRLKLVNFPPLQRNTFAKIFPLPLIFLGNMMF-------GLGGT---- 148
             :||..:...:..||:....||..|.| :....:|:..|.|.|.|.::|       ...||    
  Rat    44 -MSLTLVHFVVTWLGLYVCQKLDIFAP-KSLPLSKLLLLALSFCGFVVFTNLSLQNNTIGTYQLA 106

  Fly   149 KTLSLPMFAAL------RRFSILMTMLLELKILGLRPSNAVQVSVYAMIGGALLAASDDLSFNMR 207
            |.::.|:..|:      :||||                 .:|:::..:..|.:|.:..|:.|:..
  Rat   107 KAMTTPVIIAIQTFWYQKRFSI-----------------RIQLTLIPITVGVILNSYYDVKFHSL 154

  Fly   208 GYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYNS------LFMFLPALALNYVTGNLDQAL 266
            |.::..:...:|:...|:|..|....::....|:||.:      |.:.:|.....:..|.:    
  Rat   155 GMVFAALGVVVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPCFEPVFAEGGI---- 215

  Fly   267 NFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIVGCLKNICVTYLGMFIGGDYVFS 331
             |..|:.|. ::..|||.|:.|:::.|........|.:|..:.|..| .|:|..|.:|......|
  Rat   216 -FGPWSVSA-LLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFGHFK-FCITLCGGYILFKDPLS 277

  Fly   332 WLNCIGINISVLASLLYTY 350
            ....:||..::...|.||:
  Rat   278 VNQGLGILCTLFGILAYTH 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frcNP_524126.1 TPT 67..348 CDD:474852 68/304 (22%)
Slc35e3NP_001128159.1 TPT 16..294 CDD:474852 68/305 (22%)

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