DRSC/TRiP Functional Genomics Resources

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Protein Alignment frc and Slc35d2

DIOPT Version :9

Sequence 1:NP_001137962.1 Gene:frc / 39943 FlyBaseID:FBgn0042641 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001099568.2 Gene:Slc35d2 / 290959 RGDID:1309518 Length:326 Species:Rattus norvegicus


Alignment Length:320 Identity:147/320 - (45%)
Similarity:222/320 - (69%) Gaps:6/320 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EREDSALFVKKIG---SALFYGLSSFMITVVNKTVLTSYHFPSFLFLSLGQLTASIVVLGMGKRL 114
            |..|:|....::.   ||||||..||:|.:|||.:||:|.|||.:.|.:||:|.:|::|.:.|..
  Rat     2 EEPDAARLPSRLARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIVLGIGQMTTTIMILYVSKLN 66

  Fly   115 KLVNFPPLQRNTFAKIFPLPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRP 179
            |:::||...:....|:|||||:::||.:.||..|..||||||..||:|:|.:|:|||..|||.:.
  Rat    67 KIIHFPDFDKKIPGKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLEAIILGKQY 131

  Fly   180 SNAVQVSVYAMIGGALLAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYN 244
            |.::.:||.|::.||.:||..||:||..||::|.:.:..||:||||.|:|:|..|:||||:::||
  Rat   132 SLSIILSVLAIVLGAFIAAGSDLTFNWEGYVFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN 196

  Fly   245 SLFMFLPALALNYVTGNLDQALNFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIV 309
            :.||.:|.:.::..||:..||..|..|.:.:|:|||||||::||:|.|||.||:.:||||||.:|
  Rat   197 ACFMLIPTVIISVSTGDFQQATEFSHWKNVLFIVQFLLSCLLGFLLMYSTALCSYYNSALTTAVV 261

  Fly   310 GCLKNICVTYLGMFIGGDYVFSWLNCIGINISVLASLLYTYVTF---RRKRAPDKQDHLP 366
            |.:||:.|.|:||.:||||:||.||.||:||.:...|.|:::|.   .:.:.|..::.||
  Rat   262 GAIKNVSVAYIGMLVGGDYIFSLLNFIGLNICMAGGLRYSFLTLSSQSKPKQPVDEESLP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frcNP_001137962.1 TPT 67..348 CDD:281186 138/280 (49%)
Slc35d2NP_001099568.2 TPT 16..301 CDD:421389 139/284 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350622
Domainoid 1 1.000 341 1.000 Domainoid score I1048
eggNOG 1 0.900 - - E1_COG5070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55087
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002341
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102424
Panther 1 1.100 - - O PTHR11132
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1771
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.710

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