DRSC/TRiP Functional Genomics Resources

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Protein Alignment frc and sqv-7

DIOPT Version :9

Sequence 1:NP_001137962.1 Gene:frc / 39943 FlyBaseID:FBgn0042641 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_495436.1 Gene:sqv-7 / 174145 WormBaseID:WBGene00005025 Length:329 Species:Caenorhabditis elegans


Alignment Length:309 Identity:165/309 - (53%)
Similarity:217/309 - (70%) Gaps:4/309 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 KIGSALFYGLSSFMITVVNKTVLTSYHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFPPLQRNTF 127
            ::.||:|||:.|.:|..|||.:||:|.||||||:.:||:.|:|::|...|..::|.||.|..:..
 Worm    12 RVFSAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFPSLDSSIP 76

  Fly   128 AKIFPLPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIG 192
            .||.||||::..|::.|||||:.::||||..||||||||||:||..||.::.|.||::||..|||
 Worm    77 RKIMPLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEFYILNVKASKAVKISVGLMIG 141

  Fly   193 GALLAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYNSLFMFLPALALNY 257
            |:.:||..||||:..||..:.|.|..||:.|||.|:|||..::||||||:||.|||.||||.:..
 Worm   142 GSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLDAKDLGKYGLMFYNCLFMLLPALCVVQ 206

  Fly   258 VTGNLDQALNF---EQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIVGCLKNICVTY 319
            .||:||:|.:|   :....||:.. |||||:.||:|:||.:|||..|||||||.||.:||:.|||
 Worm   207 YTGDLDRAYSFMLSDSMTSSVWTC-FLLSCICGFVLNYSLVLCTHHNSALTTTCVGPIKNLFVTY 270

  Fly   320 LGMFIGGDYVFSWLNCIGINISVLASLLYTYVTFRRKRAPDKQDHLPST 368
            :|||..|||||.|.|..|||:||..|:||||||||.|........||.|
 Worm   271 VGMFSSGDYVFQWANFTGINVSVFGSILYTYVTFRSKSTTISYKPLPMT 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frcNP_001137962.1 TPT 67..348 CDD:281186 152/283 (54%)
sqv-7NP_495436.1 TPT 21..299 CDD:281186 148/278 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166524
Domainoid 1 1.000 297 1.000 Domainoid score I793
eggNOG 1 0.900 - - E1_COG5070
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22870
Inparanoid 1 1.050 324 1.000 Inparanoid score I1472
Isobase 1 0.950 - 0 Normalized mean entropy S1931
OMA 1 1.010 - - QHG55087
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002341
OrthoInspector 1 1.000 - - oto20631
orthoMCL 1 0.900 - - OOG6_102424
Panther 1 1.100 - - LDO PTHR11132
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R503
SonicParanoid 1 1.000 - - X1771
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.780

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