DRSC/TRiP Functional Genomics Resources

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Protein Alignment frc and slc35d2

DIOPT Version :9

Sequence 1:NP_001137962.1 Gene:frc / 39943 FlyBaseID:FBgn0042641 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_002935028.2 Gene:slc35d2 / 100493448 XenbaseID:XB-GENE-966209 Length:355 Species:Xenopus tropicalis


Alignment Length:287 Identity:142/287 - (49%)
Similarity:207/287 - (72%) Gaps:0/287 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 SALFYGLSSFMITVVNKTVLTSYHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFPPLQRNTFAKI 130
            |||||..||.:|.:|||||||.|.|||..||.:||:..:|::|.:||..::::||...|....|:
 Frog    17 SALFYAASSLLIILVNKTVLTIYRFPSSTFLGVGQMAITILILYVGKLYQIISFPDFDRQVPKKL 81

  Fly   131 FPLPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIGGAL 195
            |||||:::||.:.||..|:.||||||..||:|||.:|::||:.||..|...:|..||..:|.|||
 Frog    82 FPLPLLYIGNHLTGLSSTQKLSLPMFTVLRKFSIPLTLILEMIILRKRFPFSVVSSVTTIIMGAL 146

  Fly   196 LAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYNSLFMFLPALALNYVTG 260
            :|||.|||||:.|||.|::.:..|||.|||.|:|:|..|:||||:::||:.||.||.|....::|
 Frog   147 IAASFDLSFNLEGYILVLLNDLFTASYGVYTKEKIDPKELGKYGVLFYNASFMILPTLIYTILSG 211

  Fly   261 NLDQALNFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIVGCLKNICVTYLGMFIG 325
            :.:.|::|.:|.:..|:|||:.:|:|||||.||.:||:.::||||||::|.|||:.:.|:|:|:|
 Frog   212 DFELAIHFSEWTNIAFIVQFIFACMMGFILLYSIVLCSYYHSALTTTVIGSLKNVSIAYVGIFVG 276

  Fly   326 GDYVFSWLNCIGINISVLASLLYTYVT 352
            |||.|||.|.:|:||.:...:.|:..|
 Frog   277 GDYSFSWFNFVGLNICMAGGVAYSLST 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frcNP_001137962.1 TPT 67..348 CDD:281186 139/280 (50%)
slc35d2XP_002935028.2 TPT 13..300 CDD:421389 140/282 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55087
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002341
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11132
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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