Protein Alignment Polr3G and Polr3gl

DIOPT Version :10

• Sequence 1: NP_788522.1
• Gene: Polr3G / 39941
• FlyBaseID: FBgn0053051
• Length: 211
• Species: Drosophila melanogaster
• Sequence 2: XP_008759553.1
• Gene: Polr3gl / 690254
• RGDID: 1582857
• Length: 227
• Species: Rattus norvegicus
• Alignment Length: 204
• Identity: 61/204 - (29%)
• Similarity: 84/204 - (41%)
• Gaps: 46/204 - (22%)

  Fly     3 GRGRGGKTGTLTAEQMAM-LGCTKDMPVQT-APPPTFPPVLNRPTTLETTATQNYQLLWKEDFLN 65
            |||||  .|.||....|: :|....:|..| .|.|.|||:...|..|.......|.|..|::...
  Rat     7 GRGRG--RGQLTFNMEAVGIGKGDALPPPTLQPSPLFPPLEFHPVPLPAGEEGEYVLALKQELRG 69

  Fly    66 RMRDSPYYMISA--SRDAKNLDHK-----------DWREKAMERMKLTAQPDFNYKAMPQELNIS 117
            .||..||::..|  .||.:....|           ||            .||  ::.:|.||.|.
  Rat    70 AMRQLPYFIRPAVPKRDVERYSDKYQMSGPIDNAIDW------------NPD--WRRLPSELKIR 120

  Fly   118 SR---KRRGADARPNLLTKKTNIED----RLKVLEQKELKSGGGEQDENKQESDSEQEEEEDPEA 175
            .|   |.|.....|....|.|..::    :|:.||:||        :|...|.|.|:||||:.|.
  Rat   121 VRKVQKERTTIILPKRPPKSTEDKEETIQKLETLEKKE--------EEVTSEEDEEKEEEEEKEE 177

  Fly   176 ALDDEMDED 184
            ..::|.||:
  Rat   178 GEEEEYDEE 186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr3G	NP_788522.1	RNA_pol_3_Rpc31	29..196	CDD:463324	50/177 (28%)
Polr3gl	XP_008759553.1	RNA_pol_3_Rpc31	37..181	CDD:463324	46/165 (28%)