DRSC/TRiP Functional Genomics Resources

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Protein Alignment Polr3G and Polr3g

DIOPT Version :10

Sequence 1:NP_788522.1 Gene:Polr3G / 39941 FlyBaseID:FBgn0053051 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001074645.1 Gene:Polr3g / 67486 MGIID:1914736 Length:223 Species:Mus musculus


Alignment Length:225 Identity:66/225 - (29%)
Similarity:115/225 - (51%) Gaps:23/225 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAG-RGRGGKTGTLTAEQMAMLGCTKDMPVQTAPPPTFPPVLNRPTTLETTATQNYQLLWKEDFL 64
            ||| :|||....|...|.:......|...|...|||.||....:|..|:|...::|.|..|::..
Mouse     1 MAGNKGRGRAAYTFNIEAVGFSRGEKLPDVVLKPPPLFPDTDYKPVPLKTGEDEDYMLALKQELR 65

  Fly    65 NRMRDSPYYMISASRDAKNLDHKDWREKAMERMKLTAQPDFNYKAMPQELNISSRKRRG-ADARP 128
            ..::..||::  ...:.|..|.:.:.::.|:..|....||  ::.:|:|:....:.::| ..::|
Mouse    66 ETVKRLPYFI--EPPEEKQDDIERYSKRYMKVYKEEWVPD--WRRLPREMMPRKKCKKGDPKSKP 126

  Fly   129 NLLTKKT----NIEDRLKVLEQKELKSGGGEQ--DENKQESDSEQEEEEDPEAALDD-------- 179
            :....|.    |..|.||.:|:.| |.|.||:  :||:::..|::::::|.|...:|        
Mouse   127 SKAAAKATSLINSADVLKTIEELE-KRGEGERSDEENEEKEGSKEKDKDDEEDGEEDAEQEDYDE 190

  Fly   180 -EMDEDNDYGATYFDNGEAFN-DEDDNLDD 207
             |.:|:|||..:|||||:.|. |.|||:|:
Mouse   191 EEQEEENDYINSYFDNGDDFGVDSDDNMDE 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Polr3GNP_788522.1 RNA_pol_3_Rpc31 29..196 CDD:463324 50/182 (27%)
Polr3gNP_001074645.1 RNA_pol_3_Rpc31 33..209 CDD:463324 50/180 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..223 35/111 (32%)

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