Protein Alignment Polr3G and polr3glb

DIOPT Version :10

• Sequence 1: NP_788522.1
• Gene: Polr3G / 39941
• FlyBaseID: FBgn0053051
• Length: 211
• Species: Drosophila melanogaster
• Sequence 2: NP_001005959.2
• Gene: polr3glb / 449786
• ZFINID: ZDB-GENE-041010-32
• Length: 212
• Species: Danio rerio
• Alignment Length: 223
• Identity: 65/223 - (29%)
• Similarity: 118/223 - (52%)
• Gaps: 30/223 - (13%)

  Fly     1 MAGRGRGGKTGTLTAEQMAMLGCTKDMP---VQTAPPPTFPPVLNRPTTLETTATQNYQLLWKED 62
            |||||||..|.::   ::..:|..:::|   :|  |.|.|||:..:|..|:......|.|..|::
Zfish     1 MAGRGRGQLTFSV---EIVGIGKGENLPPSCIQ--PTPLFPPLDQKPVPLQAGEEAEYMLALKQE 60

  Fly    63 FLNRMRDSPYYMISAS--RDAKNLDHKDWREKAMERMKLTAQPDFNYKAMPQELNISSRK----- 120
            |...|:..|:|:..|:  :|.:....|..:.::.:. .|..:||  ::.:|:||.:..::
Zfish    61 FRGAMKTLPFYIRPAAPKKDVERYSDKYQKNESFDN-SLEWKPD--WRRLPKELRVREKRPQRDK 122

  Fly   121 -----RRGADARPNLLTKKTNIEDRLKVLEQKELKSGGGEQDENKQESDSEQEEEEDPEAALDDE 180
                 :|...||    ..|..|..:|:.||||| |.|..:::|.:::...|:|.|.:.|.. ::|
Zfish   123 SQAVPKRAKQAR----VDKEEIIRKLETLEQKE-KEGSSDEEEGEKKKPEEEEAEAENEYD-EEE 181

  Fly   181 MDEDNDYGATYFDNGEAF-NDEDDNLDD 207
            .:::.||..:||:|||.| .|.|:|:|:
Zfish   182 FEDETDYIMSYFENGEEFGGDSDENMDE 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr3G	NP_788522.1	RNA_pol_3_Rpc31	29..196	CDD:463324	48/178 (27%)
polr3glb	NP_001005959.2	RNA_pol_3_Rpc31	31..169	CDD:463324	37/145 (26%)