Protein Alignment Polr3G and rpc31

DIOPT Version :10

• Sequence 1: NP_788522.1
• Gene: Polr3G / 39941
• FlyBaseID: FBgn0053051
• Length: 211
• Species: Drosophila melanogaster
• Sequence 2: NP_595252.1
• Gene: rpc31 / 2541197
• PomBaseID: SPBC839.12
• Length: 210
• Species: Schizosaccharomyces pombe
• Alignment Length: 231
• Identity: 57/231 - (24%)
• Similarity: 101/231 - (43%)
• Gaps: 47/231 - (20%)

  Fly     4 RGRGGKT--GTLTAEQMAMLGCT---------KDMPVQTAPPPTFPPVLNRPTTLETTATQNYQL 57
            ||..|.|  |.:|.:::......         :|:|:|.:..|.           |....:.|:.
pombe     3 RGARGSTNLGGMTWQEVLEFNANSTPTKLYPDRDIPLQRSIRPE-----------ELLELRFYKE 56

  Fly    58 LWKEDFLNR----MRDSPYYMISASRDAKNLDHKDWREKAMERMKLT-AQPDFNYKAMPQEL--- 114
            : :..||:.    :|.:|..::..:.|.. :.:.|..:...:...|: :..|.:.|..|:||
pombe    57 I-RTSFLDESAFYIRRNPISVVQRNEDGL-VRYSDRNKPKRKNDNLSLSDLDLDPKFFPEELRKT 119

  Fly   115 ----NISSRKRRGADARPNLLTKKTNIEDRLKVLEQKELKSGGGEQDENKQESDSEQEEEEDPEA 175
                :.:.|||    || ..|..||.|:..:|..:.|:..|.....:..::..:..:||:||
pombe   120 LGAASATGRKR----AR-RKLDMKTFIDFTIKAQDLKDESSEAAHPNIEEEPDEGLEEEDED--- 176

  Fly   176 ALDDEMDEDNDYGATYFDNGEAFNDEDDNLDDGPVY 211
             ..|  |:|||||..||||||..:.:|.:.|:|.:|
pombe   177 -FGD--DDDNDYGENYFDNGEGDDYDDYDGDEGAIY 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr3G	NP_788522.1	RNA_pol_3_Rpc31	29..196	CDD:463324	43/178 (24%)
rpc31	NP_595252.1	RNA_pol_3_Rpc31	14..192	CDD:463324	44/201 (22%)