Protein Alignment Polr3G and polr3gl

DIOPT Version :10

• Sequence 1: NP_788522.1
• Gene: Polr3G / 39941
• FlyBaseID: FBgn0053051
• Length: 211
• Species: Drosophila melanogaster
• Sequence 2: NP_001106442.1
• Gene: polr3gl / 100127616
• XenbaseID: XB-GENE-945834
• Length: 215
• Species: Xenopus tropicalis
• Alignment Length: 232
• Identity: 77/232 - (33%)
• Similarity: 114/232 - (49%)
• Gaps: 45/232 - (19%)

  Fly     1 MAGRGRGGKTGTLTAEQMAMLGCTKD--MPVQT-APPPTFPPVLNRPTTLETTATQNYQLLWKED 62
            |||:|||...|.||....| :|.|:.  :|..| .|||.||.:..:|..|:|.....|.|..|::
 Frog     1 MAGKGRGSGRGQLTFNVEA-VGITRGEALPPPTLQPPPLFPNLEYKPVPLQTGEEVEYMLALKQE 64

  Fly    63 FLNRMRDSPYYMISAS--RDAKNLDHK-----------DWREKAMERMKLTAQPDFNYKAMPQEL 114
            ....|:..||::..|:  :|.:....|           ||            |||  ::.:|:||
 Frog    65 LRGAMKTLPYFIKPAAPKKDVERYSDKYQTSGPVDNAIDW------------QPD--WRLLPREL 115

  Fly   115 NISSRKRRGADARPNLLTK--------KTNIEDRLKVLEQKELKSGGGEQDENKQESDSEQEEEE 171
            .|..||.: .|....:|.|        |..|..:|:.||:||.:....|::|||:|.:.::|.||
 Frog   116 KIKVRKPQ-KDKSAVVLPKHKQRVPLDKEEIIKKLENLEKKEEEVSSEEEEENKEEEEEKEEGEE 179

  Fly   172 DPEAALDDEMDEDNDYGATYFDNGEAF-NDEDDNLDD 207
            ..|    :|.:|:.||..:||||||.| .|.|||:|:
 Frog   180 YDE----EEHEEETDYIMSYFDNGEDFGGDSDDNMDE 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr3G	NP_788522.1	RNA_pol_3_Rpc31	29..196	CDD:463324	56/188 (30%)
polr3gl	NP_001106442.1	RNA_pol_3_Rpc31	44..201	CDD:463324	51/175 (29%)