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Protein Alignment Sec3 and Exoc1l
DIOPT Version :9
Sequence 1: | NP_648976.2 |
Gene: | Sec3 / 39940 |
FlyBaseID: | FBgn0266669 |
Length: | 889 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_003751401.1 |
Gene: | Exoc1l / 686911 |
RGDID: | 1591303 |
Length: | 172 |
Species: | Rattus norvegicus |
Alignment Length: | 118 |
Identity: | 30/118 - (25%) |
Similarity: | 57/118 - (48%) |
Gaps: | 10/118 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 IKHTLQKELFLASGERLLSVVTV-VKKKDKKPCYLCVVTTAPPVPVVTLCLIKQSEQREG---EY 70
:|..|:|.||....:.|...:.: |..:|: .||||..| ....|.:.::| ..|.| :|
Rat 5 VKEDLEKRLFKPLAQNLCEFIEIEVSVQDR--YYLCVSVT--KTDEVKISMVK--HYRVGLDEKY 63
Fly 71 KRKRSWQLDEIKWVDGRNEQFETHEFDLQLEKLYKWYALNPHERQNFLAVLNR 123
:..:.|.|::::.:||:....:...|||..:|:|...|.:...:.:|...::|
Rat 64 EVTKRWSLNDLRMIDGKEADTDNPFFDLHFKKVYSLEAYSCASKYSFARTVSR 116
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Sec3 | NP_648976.2 |
PH-EXOC1 |
9..126 |
CDD:270202 |
30/118 (25%) |
Sec3_C |
200..866 |
CDD:286804 |
|
Exoc1l | XP_003751401.1 |
PH-like |
2..119 |
CDD:418428 |
30/118 (25%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166334920 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG2148 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D201698at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.840 |
|
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