DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec3 and Sec3

DIOPT Version :10

Sequence 1:NP_648976.2 Gene:Sec3 / 39940 FlyBaseID:FBgn0266669 Length:889 Species:Drosophila melanogaster
Sequence 2:XP_551765.4 Gene:Sec3 / 1280298 VectorBaseID:AGAMI1_009139 Length:890 Species:Anopheles gambiae


Alignment Length:901 Identity:555/901 - (61%)
Similarity:681/901 - (75%) Gaps:32/901 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ANIKHTLQKELFLASGERLLSVVTVVK-KKDKKPCYLCVVTTAPPVPVVTLCLIKQSEQREGEYK 71
            |.||:..|||||.|..||:|||..|.| .|.||..|||:|:|..|..:|::|.|||.:  :..||
Mosquito     3 AGIKYIFQKELFDALDERILSVCNVSKLHKRKKTSYLCIVSTIKPSVIVSVCQIKQYD--KAVYK 65

  Fly    72 RKRSWQLDEIKWVDGRNEQFETHEFDLQLEKLYKWYALNPHERQNFLAVLNRQIQKSVR-GQRAE 135
            :||||.|:|||.||||||..:||:||:.|:|.|:|:|.|.||||||:.||.:||.|... |::|.
Mosquito    66 KKRSWSLEEIKCVDGRNEATDTHDFDMLLDKPYRWFAANLHERQNFITVLWKQIHKHCTVGEKAV 130

  Fly   136 FRNVPAAWLSEKSPEKVA------LGRAVQKTQHMDDEEDEEE--EAQEFTALTDKEANELGKLF 192
            |:|:|..|||||||||..      .|.||..     |:|||.|  |.::|.||||||...|.||.
Mosquito   131 FKNIPKQWLSEKSPEKQIDEKYPNHGGAVSA-----DDEDEIEGFENEDFHALTDKEEAHLSKLV 190

  Fly   193 SECDFAIKDAEQFIEQLSRELHDLDGANMQSVLASEQKVLKMMEHIDNAISEADKFENRLDSYED 257
            :|||:||.:||.|::.||..|..|||||:||||.||::|..:||.|:.||.||:|.|.|||.|::
Mosquito   191 AECDYAISNAELFMDDLSHNLLQLDGANIQSVLESEKQVQMLMERIEEAIKEAEKVEKRLDDYDE 255

  Fly   258 ILGHVKETMEKIGGKNAMIEIANNNNIKLMKELNKVISQLDLPHSQQQALDEPDLKTANGRKAAI 322
            ||.||::||||:|.||.||||||.||::|:.||.||::||||||..|.||.:.|| |..|..|||
Mosquito   256 ILCHVRDTMEKMGEKNQMIEIANTNNVRLLLELEKVVTQLDLPHVHQLALTDTDL-TPKGLPAAI 319

  Fly   323 AAAQCLQQAMNSDIDPALLRLEAVQDQRKRFEKWKQKFSATVSRFMNNLFIHLGNEIGDMQVTST 387
            ||.:.||.|||||||||||||.|||||||||||||.|||.|:||.:||||||||| :||.|...|
Mosquito   320 AAGKALQMAMNSDIDPALLRLTAVQDQRKRFEKWKAKFSQTISRHLNNLFIHLGN-LGDSQTPFT 383

  Fly   388 -ELTLPNHSNVHRELTPYTELMHWTKAMDRKTYDGLMRVYTASLSKIYDRDVRNFFNLAKIQVTE 451
             ||:||.|.|||:||..:.|||||.|.||||.||.|::||||||||:||||::.||..||..:|.
Mosquito   384 NELSLPKHQNVHKELCTFMELMHWMKTMDRKAYDALIKVYTASLSKVYDRDIQIFFENAKQALTL 448

  Fly   452 KLRNSREDLDMSTSSRKSAVS-------TIPYGTLGINRDQWGPGVETADRMRFDALLEKVLAEL 509
            |..:||||::.|:.|.|..:.       ..|||.||.:::.|.||.|..:|.|||::||||||||
Mosquito   449 KQFSSREDINNSSISNKLKLGPQSNKQPAQPYGILGTSKEMWSPGAEAIERQRFDSILEKVLAEL 513

  Fly   510 EPIALQEQLFCINFFQMDVISPTTKNTQTTLEMEKAVDMTQSIISGAVSPSGDGVPQKRIDRQIN 574
            ||:||.||.|||.|||:||||||.|||||||:...    .:::.......:...:||:|:|||||
Mosquito   514 EPVALSEQHFCIAFFQLDVISPTAKNTQTTLDAAS----NETVNQKDERDTAPHIPQRRLDRQIN 574

  Fly   575 EDVRKLMMGLFGCLEPELVSFIQSFERVDSFYSLYVFVRLTQHVMSAQDTHSFLSMTFASALVQV 639
            ||||::|..||..||.|:.:||.|||::|::|||||.||||||||||||..|||||||||||:.|
Mosquito   575 EDVRRMMGELFANLETEINNFILSFEKLDNYYSLYVLVRLTQHVMSAQDAQSFLSMTFASALIHV 639

  Fly   640 KRSFDRFMQNQLLSIREAKLHKRSK-AILPYVENFENFAQTAEGIFRKSDRRTDMEKWYLQLVNA 703
            |||||:|||:||.||.|:||.|||| .:||||||||.||.|||.||:|::||.|::||||:||.|
Mosquito   640 KRSFDKFMQSQLQSIDESKLPKRSKCGLLPYVENFEEFAVTAENIFKKTERRNDLDKWYLKLVEA 704

  Fly   704 IFEGIQLHSQEHPKTPVQVVRMENYHHMYALLAQLKVPGLDALKKEAKKCYNDALKAYVTQYFGR 768
            |||.|.:|:.||.|||.|||:|||||.|::.|:|||:|.|::|:||||..||||.|||||:||||
Mosquito   705 IFERIPVHAAEHSKTPHQVVKMENYHRMHSTLSQLKIPVLESLRKEAKTRYNDAQKAYVTKYFGR 769

  Fly   769 PLEKLNQFFEGVQLKVAQGVKETEISYQMAFSKQELRKVIAQYPAREVKKGLENLYKKVEKHLSE 833
            |||:|||||||:|::|.||||:||||||||:|||||||||:.|||||||||||.|||||||||.|
Mosquito   770 PLERLNQFFEGIQVRVQQGVKDTEISYQMAYSKQELRKVISLYPAREVKKGLEQLYKKVEKHLCE 834

  Fly   834 EENLLQVVWHAMQEEFIAQYNYLEERIQKCYAGAMINLEFNIQDILAFFSDIARSH 889
            |||||||||.|||:|||.|||.||:.||:||||:||.|||.|.|:|.|||:||:||
Mosquito   835 EENLLQVVWRAMQQEFINQYNSLEQWIQRCYAGSMITLEFTINDLLDFFSEIAQSH 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec3NP_648976.2 PH-EXOC1 9..126 CDD:270202 64/117 (55%)
Sec3_C 200..866 CDD:401638 433/674 (64%)
Sec3XP_551765.4 None

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