DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec3 and exoc1l

DIOPT Version :10

Sequence 1:NP_648976.2 Gene:Sec3 / 39940 FlyBaseID:FBgn0266669 Length:889 Species:Drosophila melanogaster
Sequence 2:XP_017951007.1 Gene:exoc1l / 100486416 XenbaseID:XB-GENE-6462405 Length:171 Species:Xenopus tropicalis


Alignment Length:95 Identity:23/95 - (24%)
Similarity:48/95 - (50%) Gaps:4/95 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IKHTLQKELFLASGERLLSVVTVVKKKDKKPCYLCVVTTAPPVPVVTLCLIKQSEQ-REGEYKRK 73
            :|..::|:||...|..|...:. .|.:.|:..|||  |:......|.:.|:|.... .:.:|:..
 Frog     5 VKEDMEKKLFKPKGHTLYEFIE-TKSQLKERFYLC--TSVAKRKEVHISLVKHYRVCLDEKYEIA 66

  Fly    74 RSWQLDEIKWVDGRNEQFETHEFDLQLEKL 103
            ..|.|.:::::||::...:...||::.|::
 Frog    67 EIWLLKDLEYIDGKDADTDNSHFDMKFEEI 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec3NP_648976.2 PH-EXOC1 9..126 CDD:270202 23/95 (24%)
Sec3_C 200..866 CDD:401638
exoc1lXP_017951007.1 PH-EXOC1_like 2..119 CDD:270201 23/95 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.