DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a3

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_571830.1 Gene:slc6a3 / 80787 ZFINID:ZDB-GENE-010316-1 Length:629 Species:Danio rerio


Alignment Length:714 Identity:146/714 - (20%)
Similarity:256/714 - (35%) Gaps:199/714 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PTVTPSPQTTRSCISTVSSVVDSGGGRTTATSGRISSSGIVTLSDSNN---TLSEIQG-GYHDMD 177
            |.||.:...|.:.:|:||....:.|.|...         :|.:.:.|.   |.|.::. |.|...
Zfish     8 PAVTHTRTRTHTHMSSVSGSSSAAGPREVE---------LVLVKEQNGVQFTSSSLRNPGAHSHT 63

  Fly   178 HDAVSKNFSISASAHNITTASNAKLLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPREL 242
            |            .|..|..|.          ..::|.......|:..:...:..|||.|||   
Zfish    64 H------------THTHTHPSG----------QQRETWGKKIDFLLSVIGFAVDLANVWRFP--- 103

  Fly   243 DRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKG----ACMISR 297
              |      |.|:||||::.:.:.|:|:..:|:::||:..:|||..|:..|||||    ..:||.
Zfish   104 --YLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQYNREGAAGVWKICPIFKGVGFTVILISL 166

  Fly   298 F-ASWLSAI--WVSLQAVLALAYIGMFASNDLPF---------RECAGPVKLRLSG--------- 341
            : .|:.:.|  |       ||.|:....|.:||:         ..|:.|....|:.         
Zfish   167 YVGSYYNVIIAW-------ALFYLFSSFSGELPWIHCNNTWNSPNCSDPNATLLNDTYKTTPALE 224

  Fly   342 YLLTG------TSGQE-----------CLQLTFLTPFWRNPLYF----GLLAAGLIGLWIV---- 381
            |...|      :||.:           ||.:..:.      |||    |:..:|.: :||.    
Zfish   225 YFERGVLHVHESSGIDDLGAPRWQLTACLAVVIVV------LYFSLWKGVKTSGKV-VWITATMP 282

  Fly   382 -VMLCTHNAKILRRSIFVFGLV-GLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNA 444
             |:|..    :|.|.:.:.|.: |:....::       .|.|.|             ::.:|..|
Zfish   283 YVVLTV----LLLRGVTLPGAIDGIKAYLSV-------DFLRLY-------------DAQVWIEA 323

  Fly   445 LMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQNM 508
            ..|:.||:..|||.|...:....:..:..|.:::....|      ::|.|...|.: |..|:.:.
Zfish   324 ATQICFSLGVGFGVLIAFSSYNKFSNNCYRDAIITSSIN------SLTSFFSGFVIFSFLGYMSQ 382

  Fly   509 EELKPLTAIYDRVLNGSREGDS-------HLLQHLVPSLIYALII------------LSAMVSIT 554
            :.    ....|:|   :.:|..       ..:..|..|.::|:|.            :..|.|:.
Zfish   383 KH----NVALDKV---ATDGPGLVFIIYPEAIATLPGSSVWAVIFFIMLLTLGIDSAMGGMESVI 440

  Fly   555 VAVYTSTRLVPR-RPNYVICLI--GLVVAVISFAAPKFLIARVLDSRLVGTMVVTALVFELIAIT 616
            ..:....:.:.: |..:.:.::  ..::::|........:..:||....||.::..::.|.|.|.
Zfish   441 TGLIDEFKFLHKHRELFTLFIVVSTFLISLICVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGIA 505

  Fly   617 WIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTGILVWWCADDDQYDLLAEYLPRWAPILF 680
            |.||......|:|..||:.....|...| .:.|..|..::|...|..:.....:.|.|.||    
Zfish   506 WFYGVDRFSDDIEEMIGQRPGLYWRLCWKFVSPCFLLFMVVVSFATFNPPKYGSYYFPTWA---- 566

  Fly   681 VLAVIVIIACVQIFRQVE---YNFF------GMIC---------EASKPAKEWGPADPLARHSW 726
                .::..|:.|...:.   |.|:      |..|         |......|.|.......|.|
Zfish   567 ----TMVGWCLSISSMIMVPLYAFYKFCSLPGSFCDKLAYAITPETDHHLVERGEVRQFTLHHW 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 110/521 (21%)
slc6a3NP_571830.1 SLC6sbd_DAT1 76..623 CDD:212083 125/610 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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