DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a17

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001243653.1 Gene:slc6a17 / 798635 ZFINID:ZDB-GENE-030131-8187 Length:730 Species:Danio rerio


Alignment Length:778 Identity:157/778 - (20%)
Similarity:279/778 - (35%) Gaps:216/778 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 SSGIVTLSDSNNTLSEIQGGYHDMD--HDAVSKNFSISASAHNITTASNAKLLPAVEDESNKQTK 215
            ||.:.....||..::|.......::  .|..|...|::.:..:........:.|.:||  .:...
Zfish     4 SSKVTQREHSNEPVTESVADLLALEAPMDYKSSQMSMNMTGGSAPPIGKPDISPDLED--GRPAW 66

  Fly   216 CSVFRGLVLCLCLNLSYANVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGA 279
            .|..:.::..:..::...||.|||....:. |.||||||.:||.|:|:|:..||::|||.:.:|:
Zfish    67 NSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLVPYFILLILIGIPLFFLELAVGQRIRRGS 131

  Fly   280 AHTW-----RASPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRL 339
            ...|     |...|...:.|:..|.    .::.::....::.|........||:.:|  |::...
Zfish   132 IGVWNYVCPRLGGIGASSLMVCGFV----GLYYNVIIGWSIFYFFQSFQYPLPWSDC--PIRKNG 190

  Fly   340 SGYLLTGTSGQECLQLTFLTPFW-RNPLYF--------GL---LAAGLIGLWIVVMLCT-----H 387
            |..::.    .||.:.:..|.|| |..|..        ||   :...|:..||:|.|..     .
Zfish   191 SQAIVE----PECEKSSATTYFWYRETLNITSTIADSGGLNWRMTLSLLAAWIIVCLAVIKGIQS 251

  Fly   388 NAKILR-RSIFVFGLVGLVLLCTLTGWEVRNSFSR-------HYF-PELWGFDSNLLAESNIWFN 443
            :.|::. .|:|.:    :||.|.|    ||..|.:       |.| |:|     .::.|..:|..
Zfish   252 SGKVMYFSSLFPY----VVLFCFL----VRGLFLKGAVDGIAHMFTPKL-----EIMLEPQVWRE 303

  Fly   444 ALMQVLFSVNCGFGALPMITGKFLYKG-------DAVRTSVVYLCFNLLINAIAVTLFMVQFDLS 501
            |..||.|::..|||.:...:.   |..       |||..||:    |.|.:.:|..:........
Zfish   304 AATQVFFALGLGFGGVIAFSS---YNKRDNNCHFDAVLVSVI----NFLTSILATLVVFAVLGFK 361

  Fly   502 SN---------------GFQN----MEELKP-------LT------------------------- 515
            :|               |:.|    ..:|.|       ||                         
Zfish   362 ANIMNEKCVVENAEKILGYLNSNVLSHDLIPPHVNFSHLTTSDYAEMYGVIKIVKEDSFAQLGLE 426

  Fly   516 -AIYDRVLNGSREGD-------SHLLQHLVPSLIYALI------------ILSAMVSITVAVYTS 560
             .:.:..||.:.:|.       :..:.|...|..::::            ::..|..||..:..:
Zfish   427 QCLLEDELNKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFFMLINLGLGSMIGTMTGITTPILDT 491

  Fly   561 TRLVPRRPNYV---ICLIGLVVAVISFAAPKFLIARVLDSRLVGTMVVTALVFELIAITWIYGAK 622
            .::   |..|:   .|::..:..::...........:.|....|..:...::.|.:::.||||.|
Zfish   492 FKI---RKEYLTVGCCIVAFLCGLLFVQRSGNYFVTMFDDYSAGLPLTIVVILENVSVAWIYGTK 553

  Fly   623 NIYTDLEFSIGRPIFRVWMWLW----VICPAIL------------TGILVWWCADDDQYDLLAEY 671
            ....|||..:|...:.|:.:||    .:|..||            .|...|  ..|...:....|
Zfish   554 RFMQDLEDMLGFRPYSVYFYLWKYVSPVCLIILISASVVEMAISPLGYNAW--VQDLAMERFQSY 616

  Fly   672 LPRWAPIL-FVLAVIVIIACVQIFRQVEYNFFGMICEASKPAKEWGP--ADPLA---RHSWKQWR 730
             |.||.:: |.|.::.::....:|....:|              |.|  ::.|:   |.|..:..
Zfish   617 -PPWAIVMCFALIIVAMLPLPLVFIARHFN--------------WLPDGSNKLSVSYRKSLAKEA 666

  Fly   731 SVCQDTGRRDFTLRRRGTRDYTHSIKKGQYSSATKYGVQNGGQTQTPMHQQHWKSSTPGNSSP 793
            |..:|..|  |.|.:                        |..:..:|| ..|.....||::||
Zfish   667 STLEDETR--FILGK------------------------NPSEAPSPM-PSHRAYLGPGSTSP 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 118/568 (21%)
slc6a17NP_001243653.1 SLC5-6-like_sbd 63..651 CDD:294310 130/637 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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