DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a13

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001072913.1 Gene:slc6a13 / 780375 XenbaseID:XB-GENE-5947897 Length:601 Species:Xenopus tropicalis


Alignment Length:566 Identity:126/566 - (22%)
Similarity:212/566 - (37%) Gaps:143/566 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 LSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR-ASP 287
            :...||.|||     |      |.|:.:||::.||..|:|:..||.::||:..||....|| ..|
 Frog    55 IGLGNVWRFP-----YLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTSQGGVTAWRKICP 114

  Fly   288 IFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLR--LSGY-------- 342
            :|:|....|:....|...:..:....||.|:....:::||:..|.......  |..|        
 Frog   115 LFEGIGYSSQVIVMLLNCYYIVVLAWALFYLFNSFTSELPWASCGHSWNTENCLDFYKGNSTHNV 179

  Fly   343 LLTGTSGQECLQLTFLTPFW-RNPLYF--------GL---LAAGLIGLWIVVMLC-----THNAK 390
            .|.|||.        :..|| |..|..        ||   ||..|:..||:...|     ....|
 Frog   180 TLNGTSS--------VIEFWERRVLRISDGIDNIGGLHWELALCLLLAWIICYFCIWKGVKSTGK 236

  Fly   391 ILRRS-------IFVFGLVGLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQV 448
            ::..:       :.|..:.|:.|...|||.:.      :.:|:|     :.|.:..:|.:|..|:
 Frog   237 VVYFTATFPYLMLIVLLIRGVSLPGALTGIQF------YLYPDL-----SRLQDPQVWMDAGTQI 290

  Fly   449 LFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINA----------IAVTLFMVQ------ 497
            .||.....|.|..:.....|..:..|..|. |||   :|:          .::..||.:      
 Frog   291 FFSYAICLGCLTALGSYNKYNNNCYRDCVA-LCF---LNSGTSFVAGFAIFSILGFMAEEQGVHI 351

  Fly   498 FDLSSNG----------FQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVPSLIYALIILSAMVS 552
            .|::.:|          ..:|....||.|.:            .....::..|....:.:.::|:
 Frog   352 SDVAESGPGLAFIAYPRAVSMMPFSPLWACF------------FFFMVILLGLDSQFVCVESLVT 404

  Fly   553 ITVAVY-TSTRLVPRRPNYV--ICLIGLVVAVISFAAPKFLIARVLDSRLV-GTMVVTALVFELI 613
            ..|.:| |..|...||...:  :.:|..:|.:|........:.::.|.... |..::...:||.:
 Frog   405 AVVDMYPTIFRKKNRRELLILGVSMISFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFETL 469

  Fly   614 AITWIYGAKNIYTDLEFSIG-RPIFRV-WMWLWV---ICPAILTGILVWWCADDDQYDLLA---E 670
            .:.|:|||.|.|..:|..|| ||...: :.||:|   :|.|.....||       :|..|.   .
 Frog   470 CVGWVYGADNFYDKVEHMIGYRPTGIIKYCWLFVTPAVCMATFLFSLV-------KYTPLTYNKH 527

  Fly   671 YL-PRWAPILFVLAVIVIIACVQI----------------FRQVEY 699
            |: |.|...:..|..:..:.|:.:                |||:.:
 Frog   528 YVYPWWGDAIGWLLALSSMVCIPLWVGYKLSTIKGSLMERFRQLTF 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 116/504 (23%)
slc6a13NP_001072913.1 SLC5-6-like_sbd 37..579 CDD:382020 126/566 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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