DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and cflar

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_004917838.1 Gene:cflar / 779578 XenbaseID:XB-GENE-988502 Length:523 Species:Xenopus tropicalis


Alignment Length:108 Identity:18/108 - (16%)
Similarity:34/108 - (31%) Gaps:44/108 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 TSGRISSSGIVTLSDSNNTLSEIQGGYHDMDHDAVSKNFSISASAHNITTASNAKLLPAVEDESN 211
            :.|::.:...:||:.....::.|..|..|:          :..|..||...          |..|
 Frog   191 SGGKLKNKTFLTLATELEKMNLIHPGKLDL----------LEQSLQNIHRI----------DLKN 235

  Fly   212 KQTKCSVFRGLVLCLCLNLSYANVVRFPREL--DRYGSAYLVP 252
            |                      :::|.:..  |||.:.:.||
 Frog   236 K----------------------IIKFKQTALPDRYNNVFGVP 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 6/36 (17%)
cflarXP_004917838.1 DED_c-FLIP_r1 73..149 CDD:260044
DED_c-FLIP_r2 160..240 CDD:260046 12/90 (13%)
CASc 297..522 CDD:381771
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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