DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a21

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_006541333.1 Gene:Slc6a21 / 76713 MGIID:1923963 Length:749 Species:Mus musculus


Alignment Length:763 Identity:145/763 - (19%)
Similarity:274/763 - (35%) Gaps:253/763 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAA 280
            :::.:..::...:..|||     |      |.::|:.|.:||.|:|:|::.:|:.:||:|.....
Mouse    58 ILILVAFSIGLGSTWRFP-----YLCHQNGGGSFLLMYFILLLLLGIPLMYMEMVIGQWLRMDNI 117

  Fly   281 HTWR-ASPIFKG-------ACMI-----SRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECA 332
            ..|: ..|...|       ||::     |...||            :|.|:|......||::.| 
Mouse   118 QAWKYLVPWLSGVGYSNILACVLVVLYNSALVSW------------SLFYLGQSFDYPLPWQNC- 169

  Fly   333 GPVKLRLSGYLLTGTSGQECLQLTFLTPFWRNP----LYFGLLAAG-----------------LI 376
             |:...||     ..:|..||        |..|    .|..||.|.                 |.
Mouse   170 -PLVENLS-----MVAGNTCL--------WSEPHQYFWYHTLLQASNQMEEGIEVLVLNVTLCLF 220

  Fly   377 GLWI---VVMLCTHNAKILRRSIFVFGLV--GLVLLC------TLTGWEVRNSFSRHYFPELWGF 430
            ..||   |.|:......:|   :.:|.::  .::|||      .|.| .||.|..|....||   
Mouse   221 ATWIFLYVTMVTRIKISVL---MMIFSILFSNVLLLCFFIRTLFLNG-SVRASLWRLVTIEL--- 278

  Fly   431 DSNLLAESNIWFNALMQVLFSVNCGFGALPMIT-GKFLYKGD-----AVRTSVVYLCFNLLINAI 489
              ::|:..:.|..|...||:|:..|.|.:  || ..:..:|:     |...::|.|..:||.:.:
Mouse   279 --SILSSLDAWRQAGGHVLYSLGLGMGTI--ITFSTYQPRGENYIKWASFVAMVNLATSLLSSFV 339

  Fly   490 AVTLFMVQ-------------------FDLSSNGF------------------------------ 505
               :|:|.                   .:|.:||.                              
Mouse   340 ---IFLVMGFWTTTSGTMCIKRSVSNLINLIANGVLPKAAWPPGDIIHKPPLEYLAWINQLPNNL 401

  Fly   506 --QNMEELKPLTAIY--DRVLNG---SREGDSHLLQHLVPSLIYALI------------ILSAMV 551
              |.:.:..|.:.:.  ::::.|   |....|..:.....|..:|:|            :|:.:.
Mouse   402 KSQVIHQTLPCSILIQKEKIMEGPGLSYVAFSQAISLFPGSSFWAIIFFMSLAIMGLGTMLTLLE 466

  Fly   552 SITVAVYTSTRLVPRRPNYV---ICLIGLVVAVISFAAPKFLIARVLDSRLVGTMVVTALVFELI 613
            .|.:.:..|.....:.||.|   :||.|.:.:::..:.|...:..:.|..||..:::..:|.:.:
Mouse   467 GIVLPLQKSISTFAKHPNLVQVLVCLGGFLGSLVFSSRPGSYVVFLFDDLLVPMVLIIIVVIQNL 531

  Fly   614 AITWIYGAKNIYTDLEFSIGRPIFR--VWMWLWVICPAILTGILVW--------------WCADD 662
            ::.|:||.|....::...:|..::.  .::|.:|..|.:|..:.::              | .|.
Mouse   532 SLAWLYGIKRFRAEVFGQLGSLVWSPFTFLWSYVTLPTLLVLLTIYFLNLYYSGSPYYVSW-NDS 595

  Fly   663 DQYDLLAEY--LP-RWAPILFVLAVIVIIACVQIFRQVEYNFFGMICEASKPAKEWGPADPLARH 724
            ..:::...|  :| .|...|.|||::.|:.                    .|.:.|...|.    
Mouse   596 MSHEVKQPYKKIPLGWVTFLSVLALLPILV--------------------YPLQHWWYLDD---- 636

  Fly   725 SWKQWRSVCQD-----TGRRDFTLRRRGTRDYTHSIKK----GQYSSATKYGVQNGGQTQTP--- 777
                 .::|:.     :.::..|:..|.|:...|.::|    .|..|...:      |:::|   
Mouse   637 -----PNICETLEKPLSSKKTVTVPNRVTQWPVHPMRKLTLRNQEKSKALF------QSKSPPEN 690

  Fly   778 -MHQQHWKSSTPGNSSPNYSGSMFGDSAIEEDI--------SVDKFPG 816
             :|.|   :......|.|||.....|:.:...:        .|.|:.|
Mouse   691 FLHPQ---TLITKKDSENYSTFSLPDATLPSQVGFSTLAIHEVSKYTG 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 112/580 (19%)
Slc6a21XP_006541333.1 SLC5-6-like_sbd 48..622 CDD:382020 121/610 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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