DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a19

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_083154.1 Gene:Slc6a19 / 74338 MGIID:1921588 Length:634 Species:Mus musculus


Alignment Length:602 Identity:133/602 - (22%)
Similarity:239/602 - (39%) Gaps:144/602 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRA 285
            ::.|:...:...||.|||.....: |.|:::|:::||...|:|::.||.::||.|.:|:...|.:
Mouse    42 MLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGIPLLYLEFAIGQRLRKGSMGVWSS 106

  Fly   286 -SPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSG 349
             .|..||..:.|.|.|::..::.:......:.|........||:.||  |:....:||:      
Mouse   107 IHPALKGIGIASMFVSFMVGLYYNTIIAWVMWYFFNSFQEPLPWSEC--PLNQNQTGYV------ 163

  Fly   350 QECLQLTFLTPFW-RNPLYF--GLLAAGLIGLWIVVML-CTHNAK---ILR------RSIFVFGL 401
            :||.:.:.:..|| |..|..  .:..:|.|..||::.| |..:..   |:|      :::::...
Mouse   164 EECAKSSSVDYFWYRETLNISTSISDSGSIQWWILLCLTCAWSVLYVCIIRGIETTGKAVYITST 228

  Fly   402 VGLVLL-------CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGAL 459
            :..|:|       .||.|  ..|.....:.|.:     ..|:..|.|.:|..||.:|.:..||.|
Mouse   229 LPYVVLTIFLIRGLTLKG--ATNGIVFLFTPNI-----TELSNPNTWLDAGAQVFYSFSLAFGGL 286

  Fly   460 PMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLF--MVQFDLSS--------------NGF--- 505
            ...:.......:....||:....|...:..|.|:.  ::.|..:.              |||   
Mouse   287 ISFSSYNSVHNNCEMDSVIVSVINGFTSVYAATVVYSIIGFRATERFDDCVNTNILTLINGFDLP 351

  Fly   506 ------QNME---------------ELKPLTAIYDRVLNGSREGDSHLLQHLV-----------P 538
                  :|.|               :||..|...:..|:...||..  |..:|           |
Mouse   352 EGNVTSENFEAYQQWCNATNPQAYAQLKFQTCDINSFLSEGVEGTG--LAFIVFTEAITKMPVSP 414

  Fly   539 --SLIYALII----LSAM---VSITVAVYTSTRLVPRR-PNY----VICL-IGLVVAVISFAAPK 588
              |:::.:::    ||:|   :...|.......:.|:: |..    :||| ..|:..:.:..:.:
Mouse   415 LWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDLNITPKKWPKELLTGLICLGTYLIAFIFTLNSGQ 479

  Fly   589 FLIARVLDSRLVGTMVVTALVF-ELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAIL 651
            :.:: :||| ..|::.:..:.| |:.|:.::||......|:||.||......|...| |:.|.|:
Mouse   480 YWLS-LLDS-FAGSIPLLIIAFCEMFAVVYVYGVDRFNKDIEFMIGHKPNIFWQVTWRVVSPLIM 542

  Fly   652 TGILVW--------------WCADDDQYDLLAEY-------LPRWAPILFVLAVIVIIA---CVQ 692
            ..|.::              |   |..|:   |:       .|.|     |.||:|.:|   |:.
Mouse   543 LVIFLFFFVIEVNKTLMYSIW---DPNYE---EFPKSQKIPYPNW-----VYAVVVTVAGVPCLS 596

  Fly   693 IFRQVEYNFFGMICEAS 709
            |.....|.|....|:.|
Mouse   597 IPCFAIYKFIRNCCQKS 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 116/540 (21%)
Slc6a19NP_083154.1 SLC5-6-like_sbd 32..612 CDD:294310 132/599 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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