DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and Slc6a19

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001034811.2 Gene:Slc6a19 / 664630 RGDID:1594328 Length:634 Species:Rattus norvegicus


Alignment Length:596 Identity:130/596 - (21%)
Similarity:237/596 - (39%) Gaps:132/596 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRA 285
            ::.|:...:...||.|||.....: |.|:::|:::||.|.|:|::.||.::||.|.:|:...|.:
  Rat    42 MLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGIPLLHLEFAIGQRLRKGSVGVWSS 106

  Fly   286 -SPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSG 349
             .|..||..:.|.|.|::..::.:......:.|........||:.||  |:....:||:      
  Rat   107 IHPALKGVGIASMFVSFMVGLYYNTIIAWVMWYFFNSFQEPLPWSEC--PLNQNQTGYV------ 163

  Fly   350 QECLQLTFLTPFW-RNPLYF--GLLAAGLIGLWI---------VVMLCT-HNAKILRRSIFVFGL 401
            :||.:.:.:..|| |..|..  .:..:|.|..||         |:.:|| ...:...:::::...
  Rat   164 EECAKSSSVDYFWYRETLNISTSISDSGSIQWWILLCLTCAWSVLYVCTIRGIETTGKAVYITST 228

  Fly   402 VGLVLL-------CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGAL 459
            :..|:|       .||.|  ..|.....:.|.:     ..|:..|.|.:|..||.:|.:..||.|
  Rat   229 LPYVVLTIFLIRGLTLKG--ATNGIVFLFTPNI-----TELSNPNTWLDAGAQVFYSFSLAFGGL 286

  Fly   460 PMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLF--MVQFDLSS--------------NGF--- 505
            ...:.......:....||:....|...:..|.|:.  ::.|..:.              |||   
  Rat   287 ISFSSYNSVHNNCEMDSVIVSIINGFTSVYAATVVYSIIGFRATERFDDCVNTNILTLINGFDLP 351

  Fly   506 ------QNME---------------ELKPLTAIYDRVLNGSREGDSHLLQHLV-----------P 538
                  :|.|               :|...|...:..|:...||..  |..:|           |
  Rat   352 EGNVTAENFEAYQHWCNATNPEAYAQLTFQTCDINTFLSEGVEGTG--LAFIVFTEAITKMPVSP 414

  Fly   539 --SLIYALII----LSAM---VSITVAVYTSTRLVPRR-PNY----VICL-IGLVVAVISFAAPK 588
              |:::.:::    ||:|   :...|.......:.|:: |..    :||| ..|:..:.:..:.:
  Rat   415 LWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDLNITPKKWPKELLTGLICLGTYLIAFIFTLNSGQ 479

  Fly   589 FLIARVLDSRLVGTMVVTALVF-ELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAIL 651
            :.:: :||| ..|::.:..:.| |:.|:.::||......|:||.||......|...| |:.|.|:
  Rat   480 YWLS-LLDS-YAGSIPLLIIAFCEMFAVVYVYGVDRFNKDIEFMIGHKPNIFWQVTWRVVSPLIM 542

  Fly   652 TGILVW--------------WCADDDQYDLLAEY-LPRWAPILFVLAVIVIIA---CVQIFRQVE 698
            ..|.::              |..|.:::....:. .|.|     |.||:||:|   |:.|.....
  Rat   543 LVIFLFFFVIEVNKQLMYSVWDPDYEEFPKSQKVPYPDW-----VYAVVVIVAGVPCLTIPCFAI 602

  Fly   699 YNFFGMICEAS 709
            |......|:.|
  Rat   603 YKLIRNYCQKS 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 115/540 (21%)
Slc6a19NP_001034811.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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