DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and SLC6A13

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_057699.2 Gene:SLC6A13 / 6540 HGNCID:11046 Length:602 Species:Homo sapiens


Alignment Length:650 Identity:143/650 - (22%)
Similarity:238/650 - (36%) Gaps:194/650 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 TASNAKLLPAVEDESNKQTKCSVFRG-------LVLCLCLN-LSYANVVRFPRELDRY------G 246
            |.||.:..|.......|:...::.||       .||.:... :...||.|||     |      |
Human     8 TTSNGETKPVYPVMEKKEEDGTLERGHWNNKMEFVLSVAGEIIGLGNVWRFP-----YLCYKNGG 67

  Fly   247 SAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR-ASPIFKGACMISRFASWLSAIWVSLQ 310
            .|:.:||:|.||..|:|:.|||.::||:..||....|| ..|||:|.    .:||.:..|.:::.
Human    68 GAFFIPYLVFLFTCGIPVFLLETALGQYTSQGGVTAWRKICPIFEGI----GYASQMIVILLNVY 128

  Fly   311 AVLALAY--IGMFAS--NDLPFRECAGP------VKLRLSGYLLTGTSGQECLQLTFLTPFWRNP 365
            .::.||:  ..:|:|  .|||:..|...      ::.:.:...|.|||..   ..:.:..||...
Human   129 YIIVLAWALFYLFSSFTIDLPWGGCYHEWNTEHCMEFQKTNGSLNGTSEN---ATSPVIEFWERR 190

  Fly   366 L--------YFGL----LAAGLIGLWIVVMLCT-HNAKILRRSIF---VFGLVGLVLL----CTL 410
            :        :.|.    ||..|:..|::...|. ...|...:.::   .|..:.||:|    .||
Human   191 VLKISDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTL 255

  Fly   411 TGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRT 475
            .|  .......:.:|.|     ..|.:..:|.:|..|:.||.....|.|..:.....|..:..|.
Human   256 PG--AAQGIQFYLYPNL-----TRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRD 313

  Fly   476 SVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQNMEELKPLTAIYDRVLNGSREGDSHLLQHLVPS 539
            .:. |||   :|  :.|.|:..|.: |..||.:.|:..|::.:       :..|         |.
Human   314 CIA-LCF---LN--SGTSFVAGFAIFSILGFMSQEQGVPISEV-------AESG---------PG 356

  Fly   540 LIYALIILSAMVSITVAVYTSTRLVPRRPNYVICLIGLVVAV---ISFAAPKFLIARVLD----- 596
            |.:            :|...:..::|..|.:..|...:||.:   ..|...:.|:..::|     
Human   357 LAF------------IAYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPHV 409

  Fly   597 -----------------SRLVGTMVVT----------------------ALVFELIAITWIYGAK 622
                             |.|||.:::|                      ..:||.:.:.|:||||
Human   410 FRKKNRREVLILGVSVVSFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGAK 474

  Fly   623 NIYTDLEFSIGRPIFRVW-----MWLWVICPAILTGILVWWCADDDQYDLLAEYLPR-------- 674
            ..|.::|..||   :|.|     .||: :.||:.|...::         .|.:|.|.        
Human   475 RFYDNIEDMIG---YRPWPLIKYCWLF-LTPAVCTATFLF---------SLIKYTPLTYNKKYTY 526

  Fly   675 --WAPILFVLAVIVIIACVQI------------FRQVEYNFFGMICEAS-----KPAKEWGPADP 720
              |...|..|..:..:.|:..            ||:   ....::|.|.     .||....||.|
Human   527 PWWGDALGWLLALSSMVCIPAWSLYRLGTLKGPFRE---RIRQLMCPAEDLPQRNPAGPSAPATP 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 122/537 (23%)
SLC6A13NP_057699.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 4/13 (31%)
SLC6sbd_GAT2 32..575 CDD:271396 133/611 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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