DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and SLC6A12

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001116319.1 Gene:SLC6A12 / 6539 HGNCID:11045 Length:614 Species:Homo sapiens


Alignment Length:547 Identity:123/547 - (22%)
Similarity:216/547 - (39%) Gaps:129/547 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 LSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR-ASP 287
            :...||.|||     |      |.|:.:||.:..|:.|:|:..||:::||:..||:...|| ..|
Human    54 IGLGNVWRFP-----YLCYKNGGGAFFIPYFIFFFVCGIPVFFLEVALGQYTSQGSVTAWRKICP 113

  Fly   288 IFKGACMIS-RFASWLSAIWVSLQAVLALAYIGMFAS--NDLPFRECAGPVKL-RLSGYLLTGTS 348
            :|:|..:.| ...|:|:..::   .:||.|...:|:|  ::||:..|...... ..:.:|....:
Human   114 LFQGIGLASVVIESYLNVYYI---IILAWALFYLFSSFTSELPWTTCNNFWNTEHCTDFLNHSGA 175

  Fly   349 GQECLQLTFLTP---FWRNPLYFGL-------------LAAGLIGLWIVVMLCT-HNAKILRRSI 396
            |.......|.:|   ||...: .|:             ||..|:..|::...|. ...|...:.:
Human   176 GTVTPFENFTSPVMEFWERRV-LGITSGIHDLGSLRWELALCLLLAWVICYFCIWKGVKSTGKVV 239

  Fly   397 F---VFGLVGLVLL----CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNC 454
            :   .|..:.||:|    .||.|  .......:..|:|:     .|.:..:|.:|..|:.||...
Human   240 YFTATFPYLMLVILLIRGVTLPG--AYQGIIYYLKPDLF-----RLKDPQVWMDAGTQIFFSFAI 297

  Fly   455 GFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQNMEELKPLTAIY 518
            ..|.|..:.....|..:..:..:. |||   :|  :.|.|:..|.: |..||.:.|:..|::.:.
Human   298 CQGCLTALGSYNKYHNNCYKDCIA-LCF---LN--SATSFVAGFVVFSILGFMSQEQGVPISEVA 356

  Fly   519 DRVLNGSREGDSHL----------LQHLVPSLIYALIIL----SAMVSITVAVYTSTRLVPR--R 567
            :     |..|.:.:          |..|...|.:.::|.    |..|.:...|..|..:.||  |
Human   357 E-----SGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASIDMFPRQLR 416

  Fly   568 PNYVICLIGLVVAVISFAAPKFLIARVLDSRLVGTMVVTAL---------------VFELIAITW 617
            .:....|:.|.:||:.:....||:..       |.|.:..|               :||::.|:|
Human   417 KSGRRELLILTIAVMCYLIGLFLVTE-------GGMYIFQLFDYYASSGICLLFLSLFEVVCISW 474

  Fly   618 IYGAKNIYTDLEFSIGRPIFRVW-----MWLWVICPAILTGILVWWCADDDQYDLLAEY------ 671
            :|||...|.::|..||   :|.|     .||: :.|.:.....::         .|::|      
Human   475 VYGADRFYDNIEDMIG---YRPWPLVKISWLF-LTPGLCLATFLF---------SLSKYTPLKYN 526

  Fly   672 ----LPRWAPILFVLAVIVIIACVQIF 694
                .|.|...:.....:..:.||.:|
Human   527 NVYVYPPWGYSIGWFLALSSMVCVPLF 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 116/500 (23%)
SLC6A12NP_001116319.1 SLC6sbd_BGT1 35..575 CDD:212080 123/547 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 576..614
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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