DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and SLC6A3

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001035.1 Gene:SLC6A3 / 6531 HGNCID:11049 Length:620 Species:Homo sapiens


Alignment Length:652 Identity:133/652 - (20%)
Similarity:233/652 - (35%) Gaps:183/652 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 TTASNAKLLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRY------GSAYLVPY 253
            :|.:|.:..|.  :..:::|.......|:..:...:..|||.|||     |      |.|:||||
Human    45 STLTNPRQSPV--EAQDRETWGKKIDFLLSVIGFAVDLANVWRFP-----YLCYKNGGGAFLVPY 102

  Fly   254 VVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFASWLSAIWVSL--QAVLALA 316
            ::.:.:.|:|:..:|:::|||..:|||..|:..||.||.    .|...|.:::|..  ..::|.|
Human   103 LLFMVIAGMPLFYMELALGQFNREGAAGVWKICPILKGV----GFTVILISLYVGFFYNVIIAWA 163

  Fly   317 YIGMFAS--NDLPFREC------------------------------------------------ 331
            ...:|:|  .:||:..|                                                
Human   164 LHYLFSSFTTELPWIHCNNSWNSPNCSDAHPGDSSGDSSGLNDTFGTTPAAEYFERGVLHLHQSH 228

  Fly   332 ----AGPVKLRLSGYLLTGTSGQECLQLTFLTPFWRNPLYF----GLLAAGLIGLWIVVML--CT 386
                .||.:.:|:.          ||.|..:.      |||    |:..:|.: :||...:  ..
Human   229 GIDDLGPPRWQLTA----------CLVLVIVL------LYFSLWKGVKTSGKV-VWITATMPYVV 276

  Fly   387 HNAKILRRSIFVFGLVGLVLLCTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFS 451
            ..|.:||         |:.|...:.|  :|...|..::         .|.|:::|.:|..||.||
Human   277 LTALLLR---------GVTLPGAIDG--IRAYLSVDFY---------RLCEASVWIDAATQVCFS 321

  Fly   452 VNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQNMEELKPLT 515
            :..|||.|...:....:..:..|.::|....|      ::|.|...|.: |..|:...:...|:.
Human   322 LGVGFGVLIAFSSYNKFTNNCYRDAIVTTSIN------SLTSFSSGFVVFSFLGYMAQKHSVPIG 380

  Fly   516 AIYDRVLNGSREGDSHLLQHLVPSLIYALIILSA--------------------MVSITVAVYTS 560
            .:       :::|.. |:..:.|..|..|.:.||                    |.|:...:...
Human   381 DV-------AKDGPG-LIFIIYPEAIATLPLSSAWAVVFFIMLLTLGIDSAMGGMESVITGLIDE 437

  Fly   561 TRLVPRRPNYVICLIGLVVAVISFAAPKFLIAR-------VLDSRLVGTMVVTALVFELIAITWI 618
            .:|:.|...    |..|.:.:.:|....|.:..       :||....||.::..::.|.|.:.|.
Human   438 FQLLHRHRE----LFTLFIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWF 498

  Fly   619 YGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTGILVWWCADDDQYDLLAEYLPRWAPILFVL 682
            ||......|::...|:.....|...| ::.|..|..::|............|...|.||..|..:
Human   499 YGVGQFSDDIQQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVTFRPPHYGAYIFPDWANALGWV 563

  Fly   683 AVIVIIACVQIFRQVEY-----NFFGMICEASKPAKEWGPADPLARHSWKQWRSVCQDTGRRDFT 742
            .....:|.|.|:...::     :|...:..|..|.|:               |.:......|.||
Human   564 IATSSMAMVPIYAAYKFCSLPGSFREKLAYAIAPEKD---------------RELVDRGEVRQFT 613

  Fly   743 LR 744
            ||
Human   614 LR 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 111/536 (21%)
SLC6A3NP_001035.1 SLC6sbd_DAT1 60..614 CDD:212083 127/632 (20%)
Interaction with TGFB1I1. /evidence=ECO:0000269|PubMed:12177201 561..590 4/28 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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