DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and SLC6A2

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001165975.1 Gene:SLC6A2 / 6530 HGNCID:11048 Length:628 Species:Homo sapiens


Alignment Length:655 Identity:147/655 - (22%)
Similarity:246/655 - (37%) Gaps:179/655 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRY------GSAYLVPYVVLLFLV 260
            |.|...|...::|.......|:..:...:..|||.|||     |      |.|:|:||.:.|.:.
Human    46 LAPRDGDAQPRETWGKKIDFLLSVVGFAVDLANVWRFP-----YLCYKNGGGAFLIPYTLFLIIA 105

  Fly   261 GLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFASWLSAIWVSL--QAVLALAYIGMFAS 323
            |:|:..:|:::||:..:|||..|:..|.|||.    .:|..|.|::|..  ..::|.:...:|:|
Human   106 GMPLFYMELALGQYNREGAATVWKICPFFKGV----GYAVILIALYVGFYYNVIIAWSLYYLFSS 166

  Fly   324 --NDLPFRECA---------------GPV---KLRLSGYLLT--------------GTSGQE--- 351
              .:||:.:|.               |.|   ..:.|.|..|              .:||..   
Human   167 FTLNLPWTDCGHTWNSPNCTDPKLLNGSVLGNHTKYSKYKFTPAAEFYERGVLHLHESSGIHDIG 231

  Fly   352 --------CLQLTFLTPFWRNPLYF----GLLAAGLIGLWIVVMLCTHNAKILRRSIFVFGLVGL 404
                    ||.:..:.      |||    |:..:|.: :||...|          ..||. .|.|
Human   232 LPQWQLLLCLMVVVIV------LYFSLWKGVKTSGKV-VWITATL----------PYFVL-FVLL 278

  Fly   405 VLLCTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMIT--GKF- 466
            |...||.|  ..|..:.:..     .|...|.|:.:|.:|..|:.||:..|||.|....  .|| 
Human   279 VHGVTLPG--ASNGINAYLH-----IDFYRLKEATVWIDAATQIFFSLGAGFGVLIAFASYNKFD 336

  Fly   467 --LYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDLSSNGFQNMEELKPLTAIYDRVLNGSREGD 529
              .|: ||:.||.:. |....::..|:  |.:...::.....|:|::             :.|| 
Human   337 NNCYR-DALLTSSIN-CITSFVSGFAI--FSILGYMAHEHKVNIEDV-------------ATEG- 383

  Fly   530 SHLLQHLVP--------SLIYALII------------LSAMVSITVAVYTSTRLVPRRPNYVICL 574
            :.|:..|.|        |..:|::.            :..|.::...:....:::.|...    |
Human   384 AGLVFILYPEAISTLSGSTFWAVVFFVMLLALGLDSSMGGMEAVITGLADDFQVLKRHRK----L 444

  Fly   575 IGLVVAVISFAAPKFLIAR-------VLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFSI 632
            ....|...:|....|.|.:       :||:...||.::.|::.|.|.::|.||......|::..:
Human   445 FTFGVTFSTFLLALFCITKGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSNDIQQMM 509

  Fly   633 GRPIFR---VWMWLW-VICPAILTGILVWWCADDD--QYDLLAEYL-PRWA-----PILFVLAVI 685
            |   ||   .|...| .:.||.|..::|....:..  .||   :|: |.||     .|.....|:
Human   510 G---FRPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYD---DYIFPPWANWVGWGIALSSMVL 568

  Fly   686 VIIACVQIFRQVEYNFFGMICEASKPAKEWGPADPLARHSWKQWRSVCQDTGRRDFTLR-RRGTR 749
            |.|..:..|...:.:.:..:.....|..|         |.....|.:      |.|.:: |:|.|
Human   569 VPIYVIYKFLSTQGSLWERLAYGITPENE---------HHLVAQRDI------RQFQMKTRQGRR 618

  Fly   750 DYTHS 754
            ..|:|
Human   619 RATNS 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 121/532 (23%)
SLC6A2NP_001165975.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
SLC6sbd_NET 56..612 CDD:212081 139/632 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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