DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a1l

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_021330952.1 Gene:slc6a1l / 568985 ZFINID:ZDB-GENE-041210-296 Length:578 Species:Danio rerio


Alignment Length:594 Identity:137/594 - (23%)
Similarity:232/594 - (39%) Gaps:124/594 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 YHDMDHDAVSKNFSISASAHNITTASNAKLLPAVEDESNKQTKCSVFRG----LVLCLCLNLSYA 233
            :.|:||:::                       .||::.||......::|    |:.|:...:...
Zfish     7 FEDLDHNSI-----------------------PVEEKENKIPDRGSWKGKFDFLLSCVGYAIGLG 48

  Fly   234 NVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKG---ACM 294
            ||.|||....:. |.|:|:||...|...|:|:.|||.::||:...|....|:..|:.||   |.:
Zfish    49 NVWRFPYLCGKNGGGAFLIPYFTTLVFAGIPLFLLETALGQYTSVGGLGVWKLIPMMKGVGLAAV 113

  Fly   295 ISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGP--VKLRLSGYLLTGTSGQECLQLTF 357
            :..|  ||:..::.:.| .||.|:......:||::.|..|  .....|.|.|..|:...    :.
Zfish   114 VLSF--WLNIYYIIIIA-WALYYLFSSLKAELPWQTCDNPWNTDRCFSNYSLLDTTNLS----SA 171

  Fly   358 LTPFW-RN--PLYFGLLAAG-----LIGL----WIVVML-----CTHNAKILRRS-------IFV 398
            :|.|| ||  .|..||...|     |:|.    ||:|..     .....|::..|       :|:
Zfish   172 VTEFWERNMHQLTNGLEEPGELRWPLVGTLALSWILVYFSIWKGVEWTGKVVYFSATYPYFMLFI 236

  Fly   399 FGLVGLVLLCTLTG--WEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPM 461
            ....|:.|...:.|  :.:..:|             |.|.:|.:|.:|..|:.||...|.|:|..
Zfish   237 LFFRGVTLPGAIDGVLFYITPNF-------------NKLLKSEVWLDAATQIFFSYGLGLGSLIA 288

  Fly   462 ITGKFLYKGDAVRTSVVYLCFNLLINAIA-VTLFMVQFDLSSNGFQNMEELKPLTAIYDRVLNGS 525
            :.....:..:..|.||:..|.|...:..| :.:|.:.      ||.:....:|:     ..|..|
Zfish   289 LGSYNSFNNNVYRDSVIVCCINSCTSMFAGIVIFSIV------GFMSYITKRPI-----EELAAS 342

  Fly   526 REGDSHL-----LQHLVPSLIYALIILSAMVSI-------TVAVYTSTRLVPRRPN--------- 569
            ..|.:.|     :..|..|.::|::..|.::.:       ||..:. |.|:...|.         
Zfish   343 GPGLAFLAYPQAVTQLPMSSLWAILFFSMLMMLGLDSQFCTVEGFI-TALMDEYPTVLRKRKKIF 406

  Fly   570 -YVICLIGLVVAVISFAAPKFLIARVLDSRLVGTMVVTALV-FELIAITWIYGAKNIYTDLEFSI 632
             .::||:..::...:.......:.::.|......|.:..|| ||.|:|.|.|||:..|.::|..|
Zfish   407 ILIVCLVSFIIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETISIAWFYGAEKFYKNIEEMI 471

  Fly   633 GRPIFRVWMWLWV-ICPAILTGILVWWCADDDQYDLLAEYLPRWAP---ILFVLAVIVIIACVQI 693
            |......|...|: ..|.|..|:..:...:.....|.....|.|..   .|..|:.:|:|.    
Zfish   472 GYRPCGFWKQCWIYFTPTICLGVFTFSAIEMTPLTLGKYVYPAWGQGVGWLMSLSSMVLIP---- 532

  Fly   694 FRQVEYNFF 702
             ..:.|.||
Zfish   533 -GYIIYMFF 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 120/500 (24%)
slc6a1lXP_021330952.1 SLC5-6-like_sbd 15..558 CDD:320982 134/586 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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