DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a16b

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001103944.1 Gene:slc6a16b / 567809 ZFINID:ZDB-GENE-070424-95 Length:676 Species:Danio rerio


Alignment Length:680 Identity:157/680 - (23%)
Similarity:262/680 - (38%) Gaps:200/680 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 NLSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR-AS 286
            ::...||.|||     |      |.|:::.||||:.|||:|:..||::.||.:.||:...|| .|
Zfish    50 SVGLGNVWRFP-----YLCHQNGGGAFILLYVVLMALVGVPLFFLELAAGQSIRQGSIGVWRHIS 109

  Fly   287 PIFKG----ACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGT 347
            |...|    :|::..|.    |::.::....::.|:|......||:.:|.              |
Zfish   110 PKLVGIGYSSCVVCFFV----ALYYNVIIGWSIFYLGNSFQYPLPWEKCP--------------T 156

  Fly   348 SG----QECLQLTFLTPFW-RNPL----------YFGLLAAG-LIGLWIVVMLCTH-----NAKI 391
            .|    :||...:....|| |..|          .|..:..| |:..|::|.|..:     :.|:
Zfish   157 EGNSTVKECAASSPTAYFWYRKALDITDSIDETGEFNFILTGCLLAAWVIVCLAMYKGIKSSGKV 221

  Fly   392 LR-RSIFVFGLVGLVLLC------TLTGWEVRNSFSRHYFP--ELWGFDSNLLAESNIWFNALMQ 447
            :. .|:|.:    :||||      ||.|......|.  ::|  |:|       |:..:|..|..|
Zfish   222 MYFSSVFPY----VVLLCFLIRGVTLDGASEGIKFM--FYPRLEIW-------ADVQVWRQAATQ 273

  Fly   448 VLFSVNCGFGALPMITG-----------KFLYKGDAVRTSVV-------YLCFN----------- 483
            |.|::..|||::...:.           .|...|....|||:       .|.|.           
Zfish   274 VFFALGLGFGSVIAYSSYNPRNNNCHRDAFTVSGVNFMTSVLATLVVFAVLGFRAKTIAAECVKR 338

  Fly   484 ----------------LLINAIAVTLFMVQFDLSSNGF--QNME---ELKPLTA--IYDRVLNGS 525
                            |.|||..|.  .:..|..:|.:  |.||   ....:||  :.|.:..|.
Zfish   339 NLKALLKVTSSAPLPVLSINASDVE--SISLDEYANWYSTQGMELSISDYNITACSLEDELRQGV 401

  Fly   526 REGDSHLL-----QHLVP-----SLIYALIILSAMVS---------ITVAVYTSTRLVPRRPNYV 571
            .|.....:     ..|.|     |.::.|::|:..:|         :|....|...|...:..:.
Zfish   402 EETGLAFIAFTEAMTLFPGSPFWSALFFLMLLNLGLSTMFGTMAGILTPLTDTFKTLRNHKLIFT 466

  Fly   572 I--CLIGLVVAVISFAAPKFLIARVLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIGR 634
            |  |.:|.|:.::...........:.|.......::..::|:.|:::|:|||.....||:..:.|
Zfish   467 ICSCTVGFVIGLVFTQRCGNYFVTMFDDYSATLPLIIVVIFQTISVSWVYGADRFLEDLKQMLNR 531

  Fly   635 PIFRVWMWLW-VICPAILTGIL---------------VWWCADDDQYDLLAEYLPRWAPILFVLA 683
            |:..::.:|| .:||..:.|:|               .|......:.||  .| |.||  |.||.
Zfish   532 PVPVIYKYLWKFVCPIAMLGLLGASLLKMILKRPEYSAWNREKASKEDL--PY-PDWA--LAVLI 591

  Fly   684 VIVIIACVQIFRQVEYNFFGMICEASKPAKEWGPADPLARHSWKQWRSVCQDTGRRDFTLRRRGT 748
            :::|||.:.:  .:.| ...::.|....:    |||..||:      :.|..|   |..|....|
Zfish   592 ILIIIASLPV--PIGY-IHSLLLERLGQS----PADTEARY------TPCATT---DTDLTPLST 640

  Fly   749 ----RD---YTHSIKKGQYSSATKYGVQNG 771
                ||   .:|.:.:|.::|    .:|||
Zfish   641 LPPSRDDLNSSHPLLEGNHNS----HLQNG 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 125/559 (22%)
slc6a16bNP_001103944.1 SLC6sbd-B0AT-like 33..607 CDD:271364 138/602 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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