DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a7

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_005161359.1 Gene:slc6a7 / 562050 ZFINID:ZDB-GENE-070112-1492 Length:652 Species:Danio rerio


Alignment Length:621 Identity:134/621 - (21%)
Similarity:228/621 - (36%) Gaps:151/621 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 SGIVTLSDSNNTLSEIQGGYHDMDHDAVSKNFSISASAHNITTASNAKLLPAVEDESNKQTKCSV 218
            :|::|...:.|...:         :.|||.  .:::.:...::|::....|..:....|      
Zfish    30 NGVITTPSTENPAHQ---------NGAVSS--PVASQSQPPSSAASPPAQPPRDQWGGK------ 77

  Fly   219 FRGLVLCLCLNLSYANVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHT 282
            :..|:.|:...:...||.|||....|. |..:|:||.::||..|:|:.|:|:|:||:...|....
Zfish    78 YEFLLSCIGYCVGLGNVWRFPYLCYRNGGGVFLIPYFIMLFFTGMPLFLMELSLGQYGAAGPITV 142

  Fly   283 WRASPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGT 347
            |:..|:.||..:.....|.|..::.::.......|:|....:.||: .|.....:.|        
Zfish   143 WKCCPLLKGIGIGMLCVSTLVCLYYNVIIAWTFYYLGSSFQSPLPW-SCDALQNIAL-------- 198

  Fly   348 SGQECLQLTFLTP-----FW-------------------RNPLYFGLLAAGLIGLWIVVMLCTHN 388
                |...|..|.     ||                   |.||...||||     ||::.||   
Zfish   199 ----CANKTNSTQSPSEVFWNEKVLGVVHSTGLSDPGPVRWPLALCLLAA-----WIIIFLC--- 251

  Fly   389 AKILRRSIFVFGLVGLV---------LLCTLTGWEVRNSFS--RHYFPELWGFDSNLLAESNIWF 442
               :.:.|...|.|..|         |:..:.|..:..|..  ..|....|    :.||::.:|.
Zfish   252 ---MLKGIHSSGKVVYVTATFPYFVLLVLIIRGATLEGSLDGVAFYLTPKW----DQLADAQVWN 309

  Fly   443 NALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDL-SSNGFQ 506
            :|..|:.:|:..|.|.|..:.....:..:.:|.:::....|      ..|.|...|.: |..|..
Zfish   310 DAASQIFYSLGIGVGGLLSMASYNKFDNNVIRDTIIITIGN------CSTSFFAGFAIFSILGHM 368

  Fly   507 NMEELKPLTAIYD--------------RVLNGSREGDSHLLQHLVPSLIYALI--------ILSA 549
            ..::..|:..:.|              .:|.||          :..|:::.|:        :...
Zfish   369 AFKKGVPVDKVADSGPGLAFVAYPEALALLPGS----------VFWSILFFLMLFMLGVDTLFGN 423

  Fly   550 MVSITVAVYTSTRLVPR-RPNYVICLIGLVVAVISFAAPKFLIA--------RVLD--SRLVGTM 603
            |..|..||...   .|: |.|.....:.|.|...||.....|:.        .::|  |...|.:
Zfish   424 MEGICTAVLDE---FPQLRSNLKHKTLFLAVLCFSFYLMGLLLITDGGIYWFTLIDSFSTSFGLI 485

  Fly   604 VVTALVFELIAITWIYGAKNIYTDLEFSIGR-PIFRVWMWL-----WVI-CPAILTGILVWWCAD 661
            ::|  :|..|.|::.||......|:...|.| |.:...|.|     ||: .|.:||.||.:... 
Zfish   486 IIT--LFMCIGISFFYGVNQFCQDIVDMICRCPPWCTKMLLYFKACWVVFTPFLLTFILTYIFI- 547

  Fly   662 DDQYDLLAEY----LPRWAPILFVLAVIVIIACVQI 693
             :.|.....|    .|.|...|.|  .:..:.|:||
Zfish   548 -EMYRTSLRYGSYVYPIWGKALGV--CMGALCCLQI 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 116/516 (22%)
slc6a7XP_005161359.1 SLC5-6-like_sbd 71..610 CDD:294310 126/569 (22%)
PotE <235..564 CDD:223605 79/366 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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