DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a22.2

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_005166102.1 Gene:slc6a22.2 / 561024 ZFINID:ZDB-GENE-030616-628 Length:608 Species:Danio rerio


Alignment Length:578 Identity:136/578 - (23%)
Similarity:230/578 - (39%) Gaps:144/578 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 PAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGL 262
            ||.|..:||........|.::.|      .||.|||     |      |.|:.||||:.||..|:
Zfish    26 PAREQWANKLEFLLAVAGHIIGL------GNVWRFP-----YLCYKNGGGAFFVPYVLFLFTCGI 79

  Fly   263 PMVLLEISVGQFLGQGAAHTWR-ASPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFAS--N 324
            |:..||.|:|||..||....|| ..|:|:|....|:.....:.::..:  :||.|::.:|:|  :
Zfish    80 PLFFLETSLGQFTSQGGITCWRKICPLFEGLGFGSQVVVLYTGVYYII--ILAWAFLYLFSSFTS 142

  Fly   325 DLPFRECAGPVKLRLSGYLLTGTSGQECLQ-----LTFLTP---------FWRNPLYFGL----- 370
            :||:..|        :.|..|    ..|::     :|..:|         ||...: .||     
Zfish   143 ELPWASC--------NNYWNT----PSCMEFSESNITEYSPNKTTSPVIEFWERRI-LGLSGGIE 194

  Fly   371 --------LAAGLIGLWIVVMLCT-HNAKILRRSIF---VFGLVGLVLL----CTLTGWEVRNSF 419
                    ||..|:..||:...|. ...|...:.::   .|..:.|::|    .||.|  ..|..
Zfish   195 QIGNVRWDLALCLLLAWIICYFCVWKGVKSTGKVVYFTATFPYLMLIVLLVRGLTLPG--AINGI 257

  Fly   420 SRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNL 484
            :.:.:|     |.:.|.:..:|.:|..|:.:|.....|.|..:.....|..:..| ..||||   
Zfish   258 TFYLYP-----DPSRLKDPQVWMDAGSQIFYSYGVCTGVLTALGSYNKYDNNCYR-DCVYLC--- 313

  Fly   485 LINAIAVTLFMVQFDL-SSNGFQNMEELKPLTAI-----------YDRVLNGSREGDSHLLQHLV 537
            |:|::  |.|:..|.: |..||...|:...::.:           |.|.:            .|:
Zfish   314 LLNSL--TSFVAGFAIFSVLGFMADEQGVDISLVAESGPGLAFIAYPRAV------------ALM 364

  Fly   538 P-----SLIYALIIL-----------SAMVSITVAVYTSTRLVPRRPNYV---ICLIGLVVAVIS 583
            |     ::.:.::|:           .|:|:....:|.|...|..|..::   ||.....|.::.
Zfish   365 PLPQLWAIFFFIMIIFLGLDSEFVYQEALVTSISDMYPSFFQVGHRRKFLLLFICSASFFVGLLM 429

  Fly   584 FAAPKFLIARVLD-SRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWL---W 644
            .......:.::.| ....|..::|..:.:.|.:.|:|||...|..:|..||   :|.|.::   |
Zfish   430 VTEGGLYVFQLFDYYACSGMTLLTFAILQSICVGWVYGADRHYDCVEDMIG---YRPWPFMKCCW 491

  Fly   645 -VICPAILTGILVWWCADDDQYDLLA---EY-LPRWAPIL---FVLAVIVIIACVQIF 694
             .:.|||.||..::...   ||..|.   || .|.|...:   |.|:..:::....|:
Zfish   492 KYLTPAICTGTFIFSLV---QYTPLKFNNEYEYPWWGYAIGGFFTLSSTLLVPLWMIY 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 121/519 (23%)
slc6a22.2XP_005166102.1 SLC6sbd-TauT-like 28..565 CDD:271387 134/576 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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