DRSC/TRiP Functional Genomics Resources

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Protein Alignment blot and slc6a11a

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001091857.1 Gene:slc6a11a / 558960 ZFINID:ZDB-GENE-030131-3729 Length:590 Species:Danio rerio


Alignment Length:579 Identity:138/579 - (23%)
Similarity:236/579 - (40%) Gaps:127/579 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 LSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR-ASP 287
            :...||.|||     |      |.|:.:|||:.|...|:|:.:||.|:||:..||....|| ..|
Zfish    39 IGLGNVWRFP-----YLCYKNGGGAFFIPYVLYLVTCGIPLFVLETSLGQYTSQGGIMCWRKVCP 98

  Fly   288 IFKGACMISRFASWLSAIWVSLQ--AVLALAYIGMFAS--NDLPFRECAGP----VKLRLSGYLL 344
            :|:|    ..:||.|..::.|:.  .::|.|::.:|:|  .:||:..|..|    ..:.|||...
Zfish    99 LFEG----MGYASQLIIVYGSITYIIIIAWAFLYLFSSFNVELPWASCNNPWNTDTCIVLSGRNS 159

  Fly   345 TGTSGQECLQLTFLTPFWRNPL--------YFGL----LAAGLIGLWIVVMLCT-HNAKILRRSI 396
            :..........:.:..||.:.:        :.|.    ||..|:.:||:|..|. ...|...:::
Zfish   160 SSELASPLNSSSSVMEFWHHRVLRLSSGVEHLGTVRWDLALILLLVWILVYFCIWKGVKSTGKAV 224

  Fly   397 F---VFGLVGLVLL----CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNC 454
            :   .|..|.|::|    .||.|  ..|....:.:|:|     ..||:..:|.:|..|:.:|...
Zfish   225 YFTATFPYVMLLILLLRGVTLPG--ALNGIYYYMYPDL-----TRLADPQVWMDAGTQIFYSYAI 282

  Fly   455 GFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDLSSNGFQNMEELKPLTAIYD 519
            ..|.|..:.....|..:..|.| .|||   |:|  :.|.|:       .||          ||:.
Zfish   283 CLGYLSSLGSYNQYNNNCYRDS-FYLC---LLN--SGTSFL-------GGF----------AIFS 324

  Fly   520 RVLNGSREG--DSHLLQHLVPSLI---------------------YALIIL-----------SAM 550
            .:.:.::|.  |..|:....|.|:                     :.:|||           |.|
Zfish   325 VLGHMAQEQGVDISLVAESGPGLVFIVYPQAVTMLPLSQFWAVCFFIMIILLGLDSQFVGLESIM 389

  Fly   551 VSITVAVYTSTRLVPRRPNYV--ICLIGLVVAVISFAAPKFLIARVLDSRLV-GTMVVTALVFEL 612
            .|:|....|..|...||...:  |||:...:.::........|.::.|..:. ||.::.....:.
Zfish   390 TSVTDIFPTVLRRGFRREMLLLGICLVCYFMGLLMITEGGLYIIQLFDHYVCSGTTLLFLATCQS 454

  Fly   613 IAITWIYGAKNIYTDLEFSIGRPIFRVW-----MWLWVICPAILTGILVWWCADDDQYDLLAEYL 672
            :||.|:|||...|.:::..||   ::.|     .||:| .|::..|..::............:|:
Zfish   455 VAIGWVYGADRFYENIQDMIG---YKPWPMVKYCWLYV-TPSVCVGTFIFSLVKYSPLKFNNKYM 515

  Fly   673 -PRWA-PILFVLAV----IVIIACVQIFRQVEYNFFGMICEASKPAKEWGPAD-PLARH 724
             |.|| .|.:.|||    ::.|..:....:.:..|:..:..|..||::...:. |.|.|
Zfish   516 YPWWAYGIGWFLAVSSLSLIPINMIYKLHKGKGTFWERLQLACSPAEDLPQSQRPSAHH 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 122/505 (24%)
slc6a11aNP_001091857.1 SLC6sbd-TauT-like 21..560 CDD:271387 133/563 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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