DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and slc6a16a

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_021327051.1 Gene:slc6a16a / 555229 ZFINID:ZDB-GENE-061009-43 Length:693 Species:Danio rerio


Alignment Length:596 Identity:129/596 - (21%)
Similarity:237/596 - (39%) Gaps:174/596 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 NLSYANVVRFPRELDRY------GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWR-AS 286
            ::...||.|||     |      |.|:::.||:||.::|:|:..:|::.||.:.||:...|: .|
Zfish    59 SVGLGNVWRFP-----YLCHQNGGGAFMLLYVMLLLIIGVPLFFMELAAGQSIRQGSIGVWKHIS 118

  Fly   287 PIFKG----ACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGT 347
            |...|    :||:..|.    |::.::....:|.|:|......||:.:|  ||.      :::..
Zfish   119 PRLAGIGYSSCMVCFFV----ALYYNVIIAWSLFYMGNSFQYPLPWEQC--PVD------MISNQ 171

  Fly   348 SGQECLQLTFLTPFW----------------RNPLYFGLLAAGLIGLWIVVMLC-----THNAKI 391
            :.:||...:..:.||                .||:..|.|.|.    |.:|.|.     ..:||:
Zfish   172 TVKECAASSPTSYFWFRKALDISDSIDQSGEFNPIMTGCLLAA----WAIVCLAMIKGIKSSAKV 232

  Fly   392 LR-RSIFVFGLVGLVLLCTLTGWEVR--------NSFSRHYFP--ELWGFDSNLLAESNIWFNAL 445
            :. .|:|.:.    ||:|.|    :|        :.....::|  |:||       |..:|..|.
Zfish   233 MYFSSVFPYA----VLICFL----IRGLMLDGAIDGIKYMFYPKVEIWG-------EVQVWRQAA 282

  Fly   446 MQVLFSVNCGFGAL-------P----------MITG-KFLYKGDAVRTSVVYLCF---NLLINAI 489
            .||.|::..|:|::       |          |::| .|:....|.....|.|.|   |:.::.:
Zfish   283 TQVFFALGLGYGSVIAYSSYNPIHNNCHRDAIMVSGINFMTSVLASLVVFVVLGFRAKNIALDCV 347

  Fly   490 AVTLF----MVQ----------FDLSSNGFQNMEELKPLTAIYDRVLNGSREGDSHLLQH----- 535
            |..:.    |.|          |::|......:::.:...:.|..:| ||...|..|.:.     
Zfish   348 ATNVARMAEMAQTGSSQHWRPLFNMSDPKSVVLQDYRQWYSSYGSLL-GSNITDCDLEREMSKGV 411

  Fly   536 ---------------LVP-----SLIYALIILS--------AMVSITVAVYTSTRLVPRRPNYVI 572
                           |.|     |.::.|::|:        .|..|...:..:.|::.|....:.
Zfish   412 EGTGLAFIAFTEAMALFPASPFWSTLFFLMLLNLGLSTMFGTMQGILTPLMDNFRVLGRHKTMLT 476

  Fly   573 ---CLIGLVVAVISFAAPKFLIARVLDSRLVGTMVVTALVFELIAITWIYGAKNIYTDLEFSI-G 633
               |::|.::.::...........:.|.......::..::||.:::.|||||.....|:|..: .
Zfish   477 VCSCILGFLIGLLFTQRSGNYFVTMFDDYSATLPLIIVVIFETVSVAWIYGADRFLDDVEVMLHW 541

  Fly   634 RPIFRVWMWLW-VICPAILTGIL---------------VWWCADDDQYDLLAEYLPRWAPILFVL 682
            ||.. |:.:|| .:|...:.|:|               .|......:..|  || |.||  |.||
Zfish   542 RPPV-VYRYLWKYVCLLGMVGLLAASLLRMVFKRPTYTAWNHTTGSEASL--EY-PGWA--LVVL 600

  Fly   683 AVIVIIACVQI 693
            ::::|:|.:.:
Zfish   601 SMLIIVASLPV 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 118/560 (21%)
slc6a16aXP_021327051.1 SLC6sbd-B0AT-like 42..617 CDD:271364 129/596 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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