DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment blot and slc6a19a.1

DIOPT Version :9

Sequence 1:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001091648.1 Gene:slc6a19a.1 / 553256 ZFINID:ZDB-GENE-070620-2 Length:629 Species:Danio rerio


Alignment Length:574 Identity:133/574 - (23%)
Similarity:234/574 - (40%) Gaps:137/574 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 LVLCLCLNLSYANVVRFPRELDRY-GSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRA 285
            ::.|:...:...||.|||.....: |.|:::|:::||.|.|:|::.||.::||.|..|:...||:
Zfish    41 MLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGVPLLHLEFAIGQRLRSGSVGVWRS 105

  Fly   286 -SPIFKGACMISRFASWLSAIWVSLQAVLALAYIGMFASNDLPFRECAGPVKLRLSGYLLTGTSG 349
             ||...|..:.|..||::..::.:......:.|:.......||:.:|  ||.|..:|.:      
Zfish   106 ISPYLTGVGIASMLASFIVGMYYNTIMAWVMWYLFNSLQEPLPWSQC--PVNLNRTGLV------ 162

  Fly   350 QECLQLTFLTPFW-RNPL--YFGLLAAGLIGLWIVVML----------CTHNAKILRRSIFVFGL 401
            .||.:.:.:..|| |..|  ...:..:|.:..|:|:.|          |....:...:::::...
Zfish   163 SECERSSPVDYFWYRETLNTSTAIEDSGALQWWLVLCLLCAWTFLYICCIRGIETTGKAVYITST 227

  Fly   402 VGLVLL-------CTLTGWEVRNSFSRHYFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGAL 459
            :..|:|       .||.|       |.:....|:..|.|.|...:.|.:|..|||||.:..||.|
Zfish   228 LPYVVLTIFLIRALTLKG-------SVNGIKFLFTPDVNELMNPSTWLDAGAQVLFSFSLAFGGL 285

  Fly   460 PMITGKFLYKG-------DAVRTS------------VVY------------LCFN----LLINAI 489
            ...:.   |..       |||..|            |:|            :|.:    .|:||.
Zfish   286 ISFSS---YNSVHNNCEQDAVTISIINGLTSVYSATVIYSIIGFRATENYDICLDSNILSLLNAF 347

  Fly   490 AV----------TLFMVQFDLSSNGFQNMEELKPLTAIYDRVLNGSREGDSHLLQHLV------- 537
            .:          |:.:.|.::|....  ::||:..|.....:|:...||..  |..:|       
Zfish   348 DLPEGSITENNYTVALQQLNISRPDI--IQELQLKTCDMQTLLSEGVEGTG--LAFIVFTEAITK 408

  Fly   538 ----P--SLIYALII----LSAM---VSITVAVYTSTRLVPRR-PNYVI----CLIGLVVAVISF 584
                |  |:::.:::    ||.|   :...|.......|:|:| |..|.    |::..:.|::..
Zfish   409 MPVSPLWSVLFFIMLFCLGLSTMFGNIEGVVVPLQDLNLLPKRWPKEVFTGLTCVVSFLTALVFV 473

  Fly   585 -AAPKFLIARVLDSRLVGT--MVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-V 645
             ::..:.:|  |.....|:  ::|.||. ||||:.::||......|::|.:|......|...| .
Zfish   474 QSSGNYWLA--LFDGFAGSIPLLVIALC-ELIAVVYVYGIDRFNEDIKFMVGHKPNIFWQISWRF 535

  Fly   646 ICPAILTGILVW--------------WCADDDQYDLLAEY-LPRW-APILFVLA 683
            :.|.||..||::              |......:..|.|. .|.| :.::||||
Zfish   536 LSPVILLVILIFYFITTVSKQLTYNVWDPQSADFPTLKEVDYPNWISVVIFVLA 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 124/546 (23%)
slc6a19a.1NP_001091648.1 SLC5-6-like_sbd 31..611 CDD:294310 133/574 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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